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1.5.0-DEV-1f787492c3.log
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Julia Version 1.5.0-DEV.507
Commit 1f787492c3 (2020-03-25 15:03 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed SortingAlgorithms ──────────── v0.3.1
Installed Reexport ───────────────────── v0.2.0
Installed LifeTable ──────────────────── v0.2.3
Installed OrderedCollections ─────────── v1.1.0
Installed StatsFuns ──────────────────── v0.9.4
Installed StatsModels ────────────────── v0.6.10
Installed ForwardDiff ────────────────── v0.10.9
Installed NaNMath ────────────────────── v0.3.3
Installed ArrayInterface ─────────────── v2.6.1
Installed Tables ─────────────────────── v1.0.3
Installed QuadGK ─────────────────────── v2.3.1
Installed DataAPI ────────────────────── v1.1.0
Installed NLSolversBase ──────────────── v7.6.1
Installed GLM ────────────────────────── v1.3.8
Installed Missings ───────────────────── v0.4.3
Installed WeakRefStrings ─────────────── v0.6.2
Installed Parsers ────────────────────── v0.3.12
Installed CommonSubexpressions ───────── v0.2.0
Installed IteratorInterfaceExtensions ── v1.0.0
Installed TableTraits ────────────────── v1.0.0
Installed DiffRules ──────────────────── v1.0.1
Installed CompilerSupportLibraries_jll ─ v0.3.1+0
Installed Arpack_jll ─────────────────── v3.5.0+2
Installed PDMats ─────────────────────── v0.9.12
Installed FiniteDiff ─────────────────── v2.3.0
Installed LsqFit ─────────────────────── v0.10.0
Installed StaticArrays ───────────────── v0.12.1
Installed CategoricalArrays ──────────── v0.7.7
Installed StatsBase ──────────────────── v0.32.2
Installed OptimBase ──────────────────── v2.0.0
Installed Compat ─────────────────────── v2.2.0
Installed Arpack ─────────────────────── v0.4.0
Installed DiffResults ────────────────── v1.0.2
Installed DataValueInterfaces ────────── v1.0.0
Installed FilePathsBase ──────────────── v0.7.0
Installed Requires ───────────────────── v1.0.1
Installed DataFrames ─────────────────── v0.20.2
Installed InvertedIndices ────────────── v1.0.0
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed PooledArrays ───────────────── v0.5.3
Installed ShiftedArrays ──────────────── v1.0.0
Installed FillArrays ─────────────────── v0.8.5
Installed Rmath ──────────────────────── v0.6.1
Installed DataStructures ─────────────── v0.17.10
Installed OpenBLAS_jll ───────────────── v0.3.7+8
Installed JSON ───────────────────────── v0.21.0
Installed SpecialFunctions ───────────── v0.10.0
Installed Distributions ──────────────── v0.22.6
Installed CSV ────────────────────────── v0.5.26
Updating `~/.julia/environments/v1.5/Project.toml`
4210c81c + LifeTable v0.2.3
Updating `~/.julia/environments/v1.5/Manifest.toml`
7d9fca2a + Arpack v0.4.0
68821587 + Arpack_jll v3.5.0+2
4fba245c + ArrayInterface v2.6.1
336ed68f + CSV v0.5.26
324d7699 + CategoricalArrays v0.7.7
bbf7d656 + CommonSubexpressions v0.2.0
34da2185 + Compat v2.2.0
e66e0078 + CompilerSupportLibraries_jll v0.3.1+0
9a962f9c + DataAPI v1.1.0
a93c6f00 + DataFrames v0.20.2
864edb3b + DataStructures v0.17.10
e2d170a0 + DataValueInterfaces v1.0.0
163ba53b + DiffResults v1.0.2
b552c78f + DiffRules v1.0.1
31c24e10 + Distributions v0.22.6
48062228 + FilePathsBase v0.7.0
1a297f60 + FillArrays v0.8.5
6a86dc24 + FiniteDiff v2.3.0
f6369f11 + ForwardDiff v0.10.9
38e38edf + GLM v1.3.8
41ab1584 + InvertedIndices v1.0.0
82899510 + IteratorInterfaceExtensions v1.0.0
682c06a0 + JSON v0.21.0
4210c81c + LifeTable v0.2.3
2fda8390 + LsqFit v0.10.0
e1d29d7a + Missings v0.4.3
d41bc354 + NLSolversBase v7.6.1
77ba4419 + NaNMath v0.3.3
4536629a + OpenBLAS_jll v0.3.7+8
efe28fd5 + OpenSpecFun_jll v0.5.3+3
87e2bd06 + OptimBase v2.0.0
bac558e1 + OrderedCollections v1.1.0
90014a1f + PDMats v0.9.12
69de0a69 + Parsers v0.3.12
2dfb63ee + PooledArrays v0.5.3
1fd47b50 + QuadGK v2.3.1
189a3867 + Reexport v0.2.0
ae029012 + Requires v1.0.1
79098fc4 + Rmath v0.6.1
f50d1b31 + Rmath_jll v0.2.2+0
1277b4bf + ShiftedArrays v1.0.0
a2af1166 + SortingAlgorithms v0.3.1
276daf66 + SpecialFunctions v0.10.0
90137ffa + StaticArrays v0.12.1
2913bbd2 + StatsBase v0.32.2
4c63d2b9 + StatsFuns v0.9.4
3eaba693 + StatsModels v0.6.10
3783bdb8 + TableTraits v1.0.0
bd369af6 + Tables v1.0.3
ea10d353 + WeakRefStrings v0.6.2
2a0f44e3 + Base64
ade2ca70 + Dates
8bb1440f + DelimitedFiles
8ba89e20 + Distributed
9fa8497b + Future
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
a63ad114 + Mmap
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
1a1011a3 + SharedArrays
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
4607b0f0 + SuiteSparse
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Testing LifeTable
Status `/tmp/jl_AJf7me/Project.toml`
336ed68f CSV v0.5.26
a93c6f00 DataFrames v0.20.2
38e38edf GLM v1.3.8
4210c81c LifeTable v0.2.3
2fda8390 LsqFit v0.10.0
8dfed614 Test
Status `/tmp/jl_AJf7me/Manifest.toml`
7d9fca2a Arpack v0.4.0
68821587 Arpack_jll v3.5.0+2
4fba245c ArrayInterface v2.6.1
336ed68f CSV v0.5.26
324d7699 CategoricalArrays v0.7.7
bbf7d656 CommonSubexpressions v0.2.0
34da2185 Compat v2.2.0
e66e0078 CompilerSupportLibraries_jll v0.3.1+0
9a962f9c DataAPI v1.1.0
a93c6f00 DataFrames v0.20.2
864edb3b DataStructures v0.17.10
e2d170a0 DataValueInterfaces v1.0.0
163ba53b DiffResults v1.0.2
b552c78f DiffRules v1.0.1
31c24e10 Distributions v0.22.6
48062228 FilePathsBase v0.7.0
1a297f60 FillArrays v0.8.5
6a86dc24 FiniteDiff v2.3.0
f6369f11 ForwardDiff v0.10.9
38e38edf GLM v1.3.8
41ab1584 InvertedIndices v1.0.0
82899510 IteratorInterfaceExtensions v1.0.0
682c06a0 JSON v0.21.0
4210c81c LifeTable v0.2.3
2fda8390 LsqFit v0.10.0
e1d29d7a Missings v0.4.3
d41bc354 NLSolversBase v7.6.1
77ba4419 NaNMath v0.3.3
4536629a OpenBLAS_jll v0.3.7+8
efe28fd5 OpenSpecFun_jll v0.5.3+3
87e2bd06 OptimBase v2.0.0
bac558e1 OrderedCollections v1.1.0
90014a1f PDMats v0.9.12
69de0a69 Parsers v0.3.12
2dfb63ee PooledArrays v0.5.3
1fd47b50 QuadGK v2.3.1
189a3867 Reexport v0.2.0
ae029012 Requires v1.0.1
79098fc4 Rmath v0.6.1
f50d1b31 Rmath_jll v0.2.2+0
1277b4bf ShiftedArrays v1.0.0
a2af1166 SortingAlgorithms v0.3.1
276daf66 SpecialFunctions v0.10.0
90137ffa StaticArrays v0.12.1
2913bbd2 StatsBase v0.32.2
4c63d2b9 StatsFuns v0.9.4
3eaba693 StatsModels v0.6.10
3783bdb8 TableTraits v1.0.0
bd369af6 Tables v1.0.3
ea10d353 WeakRefStrings v0.6.2
2a0f44e3 Base64
ade2ca70 Dates
8bb1440f DelimitedFiles
8ba89e20 Distributed
9fa8497b Future
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
1a1011a3 SharedArrays
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
4607b0f0 SuiteSparse
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = periodlifetable(::DataFrame, ::Int64, ::Bool, ::String) at LifeTable.jl:19
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:19
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = periodlifetable(::DataFrame, ::Int64, ::Bool, ::String) at LifeTable.jl:30
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:30
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = periodlifetable(::DataFrame, ::Int64, ::Bool, ::String) at LifeTable.jl:30
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:30
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:11
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:11
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:23
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:23
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:23
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:23
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:23
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:23
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:25
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:25
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:25
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:25
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = causelife(::DataFrame, ::Array{Float64,1}) at LifeTable.jl:87
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:87
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = causelife(::DataFrame, ::Array{Float64,1}) at LifeTable.jl:89
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:89
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = causelife(::DataFrame, ::Array{Float64,1}) at LifeTable.jl:90
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:90
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = causelife(::DataFrame, ::Array{Float64,1}) at LifeTable.jl:93
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:93
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = periodlifetable(::DataFrame, ::Int64, ::Bool, ::String) at LifeTable.jl:32
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:32
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at runtests.jl:28
└ @ Core ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:28
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = mortsurvfit(::DataFrame, ::CSV.Column{Int64,Int64}, ::String, ::String) at LifeTable.jl:119
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:119
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = mortsurvfit(::DataFrame, ::CSV.Column{Int64,Int64}, ::String, ::String) at LifeTable.jl:120
└ @ LifeTable ~/.julia/packages/LifeTable/MDhwI/src/LifeTable.jl:120
Testing LifeTable tests passed