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1.6.0-DEV-a6de8b6186.log
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Julia Version 1.6.0-DEV.587
Commit a6de8b6186 (2020-08-05 14:09 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
[ Info: LEGAL NOTICE: package operations send anonymous data about your system to https://pkg.julialang.org (your current package server), including the operating system and Julia versions you are using, and a random client UUID. Running `Pkg.telemetryinfo()` will show exactly what data is sent. See https://julialang.org/legal/data/ for more details about what this data is used for, how long it is retained, and how to opt out of sending it.
Installed Reexport ──────────────────── v0.2.0
Installed PooledArrays ──────────────── v0.5.3
Installed CrystalInfoFramework ──────── v0.1.0
Installed TableTraits ───────────────── v1.0.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed DataStructures ────────────── v0.17.20
Installed JSON ──────────────────────── v0.21.0
Installed CategoricalArrays ─────────── v0.7.7
Installed URIParser ─────────────────── v0.4.1
Installed InvertedIndices ───────────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed DataAPI ───────────────────── v1.3.0
Installed Compat ────────────────────── v3.13.0
Installed Parsers ───────────────────── v1.0.7
Installed OrderedCollections ────────── v1.3.0
Installed DataFrames ────────────────── v0.20.2
Installed DataValueInterfaces ───────── v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Tables ────────────────────── v1.0.5
Updating `~/.julia/environments/v1.6/Project.toml`
[6007d9b0] + CrystalInfoFramework v0.1.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.7
[34da2185] + Compat v3.13.0
[6007d9b0] + CrystalInfoFramework v0.1.0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.20
[e2d170a0] + DataValueInterfaces v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.3.0
[69de0a69] + Parsers v1.0.7
[2dfb63ee] + PooledArrays v0.5.3
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.5
[30578b45] + URIParser v0.4.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing CrystalInfoFramework
Status `/tmp/jl_iAJWMe/Project.toml`
[6007d9b0] CrystalInfoFramework v0.1.0
[a93c6f00] DataFrames v0.20.2
[8dfed614] Test
Status `/tmp/jl_iAJWMe/Manifest.toml`
[324d7699] CategoricalArrays v0.7.7
[34da2185] Compat v3.13.0
[6007d9b0] CrystalInfoFramework v0.1.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[e1d29d7a] Missings v0.4.3
[bac558e1] OrderedCollections v1.3.0
[69de0a69] Parsers v1.0.7
[2dfb63ee] PooledArrays v0.5.3
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[30578b45] URIParser v0.4.1
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Test simple CIF creation and destruction: Error During Test at /home/pkgeval/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:8
Test threw exception
Expression: begin
p = NativeCif(joinpath(testdir, "simple_data.cif"))
b = p["simple_data"]
t = b["_numb_su"]
true
end
could not load library "libcif"
libcif.so: cannot open shared object file: No such file or directory
Stacktrace:
[1] CrystalInfoFramework.cif_tp_ptr(p_opts::CrystalInfoFramework.cif_parse_options)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:423
[2] NativeCif(s::String; verbose::Bool)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:405
[3] NativeCif(s::String)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:403
[4] top-level scope
@ ~/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:8
[5] top-level scope
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1114
[6] top-level scope
@ ~/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:8
Test simple CIF creation and destruction: Error During Test at /home/pkgeval/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:20
Test threw exception
Expression: begin
p = NativeCif(joinpath(testdir, "simple_data.cif"))
true
end
could not load library "libcif"
libcif.so: cannot open shared object file: No such file or directory
Stacktrace:
[1] CrystalInfoFramework.cif_tp_ptr(p_opts::CrystalInfoFramework.cif_parse_options)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:423
[2] NativeCif(s::String; verbose::Bool)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:405
[3] NativeCif(s::String)
@ CrystalInfoFramework ~/.julia/packages/CrystalInfoFramework/JTcHO/src/cif_base.jl:403
[4] top-level scope
@ ~/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:20
[5] top-level scope
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1114
[6] top-level scope
@ ~/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:8
Test Summary: | Pass Error Total
Test simple CIF creation and destruction | 1 2 3
ERROR: LoadError: LoadError: Some tests did not pass: 1 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/CrystalInfoFramework/JTcHO/test/creation.jl:6
in expression starting at /home/pkgeval/.julia/packages/CrystalInfoFramework/JTcHO/test/runtests.jl:12
ERROR: Package CrystalInfoFramework errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1567
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:328
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:315
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:16