-
Notifications
You must be signed in to change notification settings - Fork 5
/
Copy path1.6.0-DEV-a6de8b6186.log
303 lines (294 loc) · 12.8 KB
/
1.6.0-DEV-a6de8b6186.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
Julia Version 1.6.0-DEV.587
Commit a6de8b6186 (2020-08-05 14:09 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
[ Info: LEGAL NOTICE: package operations send anonymous data about your system to https://pkg.julialang.org (your current package server), including the operating system and Julia versions you are using, and a random client UUID. Running `Pkg.telemetryinfo()` will show exactly what data is sent. See https://julialang.org/legal/data/ for more details about what this data is used for, how long it is retained, and how to opt out of sending it.
Installed Reexport ──────────────────── v0.2.0
Installed Requires ──────────────────── v1.0.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed ColorTypes ────────────────── v0.10.8
Installed JSON ──────────────────────── v0.21.0
Installed DataStructures ────────────── v0.17.20
Installed ArviZ ─────────────────────── v0.4.3
Installed PyPlot ────────────────────── v2.9.0
Installed PooledArrays ──────────────── v0.5.3
Installed NamedTupleTools ───────────── v0.13.6
Installed CategoricalArrays ─────────── v0.8.1
Installed InvertedIndices ───────────── v1.0.0
Installed FixedPointNumbers ─────────── v0.8.4
Installed VersionParsing ────────────── v1.2.0
Installed DataAPI ───────────────────── v1.3.0
Installed StatsBase ─────────────────── v0.33.0
Installed Colors ────────────────────── v0.12.3
Installed Compat ────────────────────── v3.13.0
Installed DataFrames ────────────────── v0.21.5
Installed MacroTools ────────────────── v0.5.5
Installed DataValueInterfaces ───────── v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed Parsers ───────────────────── v1.0.7
Installed SortingAlgorithms ─────────── v0.3.1
Installed Conda ─────────────────────── v1.4.1
Installed OrderedCollections ────────── v1.3.0
Installed PyCall ────────────────────── v1.91.4
Installed LaTeXStrings ──────────────── v1.1.0
Installed Tables ────────────────────── v1.0.5
Updating `~/.julia/environments/v1.6/Project.toml`
[131c737c] + ArviZ v0.4.3
Updating `~/.julia/environments/v1.6/Manifest.toml`
[131c737c] + ArviZ v0.4.3
[324d7699] + CategoricalArrays v0.8.1
[3da002f7] + ColorTypes v0.10.8
[5ae59095] + Colors v0.12.3
[34da2185] + Compat v3.13.0
[8f4d0f93] + Conda v1.4.1
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.5
[864edb3b] + DataStructures v0.17.20
[e2d170a0] + DataValueInterfaces v1.0.0
[53c48c17] + FixedPointNumbers v0.8.4
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[b964fa9f] + LaTeXStrings v1.1.0
[1914dd2f] + MacroTools v0.5.5
[e1d29d7a] + Missings v0.4.3
[d9ec5142] + NamedTupleTools v0.13.6
[bac558e1] + OrderedCollections v1.3.0
[69de0a69] + Parsers v1.0.7
[2dfb63ee] + PooledArrays v0.5.3
[438e738f] + PyCall v1.91.4
[d330b81b] + PyPlot v2.9.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[a2af1166] + SortingAlgorithms v0.3.1
[2913bbd2] + StatsBase v0.33.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.5
[81def892] + VersionParsing v1.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ─→ `~/.julia/packages/Conda/3rPhK/deps/build.log`
Building PyCall → `~/.julia/packages/PyCall/zqDXB/deps/build.log`
Testing ArviZ
Status `/tmp/jl_E5FB4z/Project.toml`
[131c737c] ArviZ v0.4.3
[593b3428] CmdStan v6.0.7
[8f4d0f93] Conda v1.4.1
[a93c6f00] DataFrames v0.21.5
[c7f686f2] MCMCChains v3.0.12
[0987c9cc] MonteCarloMeasurements v0.8.12
[d9ec5142] NamedTupleTools v0.13.6
[438e738f] PyCall v1.91.4
[d330b81b] PyPlot v2.9.0
[ae029012] Requires v1.0.1
[2913bbd2] StatsBase v0.33.0
[d6f4376e] Markdown
[3fa0cd96] REPL
[9a3f8284] Random
[8dfed614] Test
Status `/tmp/jl_E5FB4z/Manifest.toml`
[80f14c24] AbstractMCMC v1.0.1
[1520ce14] AbstractTrees v0.3.3
[131c737c] ArviZ v0.4.3
[39de3d68] AxisArrays v0.4.3
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.1
[593b3428] CmdStan v6.0.7
[3da002f7] ColorTypes v0.10.8
[5ae59095] Colors v0.12.3
[34da2185] Compat v3.13.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[8f4d0f93] Conda v1.4.1
[88cd18e8] ConsoleProgressMonitor v0.1.2
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.5
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[31c24e10] Distributions v0.23.8
[ffbed154] DocStringExtensions v0.8.2
[da5c29d0] EllipsisNotation v0.4.0
[1a297f60] FillArrays v0.8.13
[53c48c17] FixedPointNumbers v0.8.4
[59287772] Formatting v0.4.1
[14197337] GenericLinearAlgebra v0.2.4
[8197267c] IntervalSets v0.5.1
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[b964fa9f] LaTeXStrings v1.1.0
[1d6d02ad] LeftChildRightSiblingTrees v0.1.2
[e6f89c97] LoggingExtras v0.4.2
[c7f686f2] MCMCChains v3.0.12
[1914dd2f] MacroTools v0.5.5
[e1d29d7a] Missings v0.4.3
[0987c9cc] MonteCarloMeasurements v0.8.12
[d9ec5142] NamedTupleTools v0.13.6
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.0
[90014a1f] PDMats v0.10.0
[69de0a69] Parsers v1.0.7
[2dfb63ee] PooledArrays v0.5.3
[33c8b6b6] ProgressLogging v0.1.3
[92933f4c] ProgressMeter v1.3.2
[438e738f] PyCall v1.91.4
[d330b81b] PyPlot v2.9.0
[1fd47b50] QuadGK v2.4.0
[b3c3ace0] RangeArrays v0.3.2
[3cdcf5f2] RecipesBase v1.0.2
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[91c51154] SentinelArrays v1.2.10
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.0
[4c63d2b9] StatsFuns v0.9.5
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[5d786b92] TerminalLoggers v0.1.2
[81def892] VersionParsing v1.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
ERROR: LoadError: PyError (PyImport_ImportModule
The Python package arviz could not be found by pyimport. Usually this means
that you did not install arviz in the Python version being used by PyCall.
PyCall is currently configured to use the Python version at:
/usr/bin/python3
and you should use whatever mechanism you usually use (apt-get, pip, conda,
etcetera) to install the Python package containing the arviz module.
One alternative is to re-configure PyCall to use a different Python
version on your system: set ENV["PYTHON"] to the path/name of the python
executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.
Another alternative is to configure PyCall to use a Julia-specific Python
distribution via the Conda.jl package (which installs a private Anaconda
Python distribution), which has the advantage that packages can be installed
and kept up-to-date via Julia. As explained in the PyCall documentation,
set ENV["PYTHON"]="", run Pkg.build("PyCall"), and re-launch Julia. Then,
To install the arviz module, you can use `pyimport_conda("arviz", PKG)`,
where PKG is the Anaconda package the contains the module arviz,
or alternatively you can use the Conda package directly (via
`using Conda` followed by `Conda.add` etcetera).
) <class 'ModuleNotFoundError'>
ModuleNotFoundError("No module named 'arviz'",)
Stacktrace:
[1] pyimport(name::String)
@ PyCall ~/.julia/packages/PyCall/zqDXB/src/PyCall.jl:536
[2] pyimport_conda(modulename::String, condapkg::String, channel::String)
@ PyCall ~/.julia/packages/PyCall/zqDXB/src/PyCall.jl:694
[3] import_arviz()
@ ArviZ ~/.julia/packages/ArviZ/EhXSi/src/ArviZ.jl:95
[4] top-level scope
@ ~/.julia/packages/ArviZ/EhXSi/src/ArviZ.jl:106
[5] include
@ ./Base.jl:375 [inlined]
[6] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
@ Base ./loading.jl:1219
[7] top-level scope
@ none:1
[8] eval
@ ./boot.jl:344 [inlined]
[9] eval(x::Expr)
@ Base.MainInclude ./client.jl:445
[10] top-level scope
@ none:1
in expression starting at /home/pkgeval/.julia/packages/ArviZ/EhXSi/src/ArviZ.jl:2
ERROR: LoadError: Failed to precompile ArviZ [131c737c-5715-5e2e-ad31-c244f01c1dc7] to /home/pkgeval/.julia/compiled/v1.6/ArviZ/WF7nZ_I31IU.ji.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1350
[3] _require(pkg::Base.PkgId)
@ Base ./loading.jl:1030
[4] require(uuidkey::Base.PkgId)
@ Base ./loading.jl:928
[5] require(into::Module, mod::Symbol)
@ Base ./loading.jl:923
[6] include(fname::String)
@ Base.MainInclude ./client.jl:443
[7] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/ArviZ/EhXSi/test/runtests.jl:1
ERROR: Package ArviZ errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1567
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:328
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:315
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:16