cuda_rho_()

• Calculate Rho (density) for spiking event whose peak site occurs at site K (n1 events)
• Rho = (# neighbors with distance < dc) / # neighbors.
• Neighboring events include those whose peak is at site K (n1 events), or whose second highest peak is at site K (n2 spikes). Thus, there are n1+n2 neighboring events for n1 events at site K.
• To deal with probe drift, events that occur close in time are considered as neighbors. Otherwise, temporally proximal neighbors are considered such that |to_i-to_j| < (n1+n2)/P.nTime_clu; to_i: temporal order of spike i; to_j: temporal order of spike j (Graphics to be added)

Syntax

• vrRho1 = cuda_rho_(mrFet12, viiSpk12_ord, n1, n2, dc2, P)

Input

• mrFet12: Feature matrix (nFeatures x (n1+n2): single)
• viiSpk12_ord: Temporal order of spikes for a given set of spikes ((n1+n2) x 1: int32); 1 <= viiSpk12_ord <= (n1+n2).
• n1: number of spikes whose peak site (S0.viSite_spk) occurs at a given site
• n2: number of spikes whose next highest peak site (S0.viSite2_spk) occurs at a given site
• dc2: distance-cutoff squared
• P: Parameters struct (P)

Output

• vrRho1: Local density for each spike (n1 x 1: single)

Operations

• Initialize the CUDA kernel object
• Allocate GPU memory
• Run the CUDA code to compute rho (jrc3_cuda_rho.cu)