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NAVIGATION.md

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How to use the plumed benchmark command

The lesson contains:

  • a manual for plumed benchmark
  • a small tutorial in which I show how to measure and confront performances working with the COORDINATION action
  • a small introduction to creating a flame graph from a plumed benchmark run.
  • a list of input files that we have used in the past when benchmarking PLUMED.

The tutorial has also a companion notebook, with all the scripts I used to make the images

You should try to follow the tutorial with the manual opened in a second tab.

flowchart LR
A[benchmark manpage]
B[A benchmark tutorial]
C["A benchmark tutorial (notebook)"]
D["Flamegraph with perf from plumed benchmark"]

B <==> C
click A "README.md" "A manpage for plumed benchmark"
click B "Tutorial.md" "A tutorial on the coordination"
click C "Tutorial_notebook.ipynb" "The notebook with the scripts relative to the tutorial on the coordination"
click D "Perf.md" "A simple tutorial creating a flame graph using perf"
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