From 7bc60e4f65fae57f962e6a73e1e244ac9b0bba0a Mon Sep 17 00:00:00 2001
From: Henrik Bengtsson <henrik.bengtsson@gmail.com>
Date: Fri, 3 Jan 2025 12:44:12 -0800
Subject: [PATCH] Nagging 'ties.method' warnings now happens every 10:th call
 [#142]

---
 DESCRIPTION                |  2 +-
 NEWS.md                    | 16 +++++++++++-----
 R/options.R                |  4 ++--
 man/matrixStats.options.Rd |  2 +-
 4 files changed, 15 insertions(+), 9 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 869b273f..a836b6c5 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: matrixStats
-Version: 1.4.1-9008
+Version: 1.4.1-9009
 Depends:
   R (>= 3.4.0)
 Suggests:
diff --git a/NEWS.md b/NEWS.md
index 6c45f6ad..87d60ef1 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -12,14 +12,20 @@
    = NA` to a warning has been removed; `useNames = NA` is now always
    an error.
 
+ * Calling `colRanks()` and `rowRanks()` without explicitly specifying
+   argument `ties.method` is deprecated since version 1.3.0
+   [2024-04-10]. If not explicitly specified, a deprecation warning is
+   now produced every 10:th call not specifying the `ties.method`
+   argument.
+
  
 # Version 1.4.1 [2024-09-06]
 
 ## Bug Fixes
 
- * Fix a potential `runtime error: null pointer passed as argument 1,
-   which is declared to never be null` bug introduced in v1.4.0 that
-   was detected by the UndefinedBehaviorSanitizer (UBSan) running on CRAN.
+ * Fix a `runtime error: null pointer passed as argument 1, which is
+   declared to never be null` bug introduced in v1.4.0 that was
+   detected by the UndefinedBehaviorSanitizer (UBSan) running on CRAN.
  
 
 # Version 1.4.0 [2024-09-03]
@@ -43,8 +49,8 @@
 ## Deprecated and Defunct
 
  * Calling `colRanks()` and `rowRanks()` without explicitly specifying
-   argument `ties.method` is deprecated since version 1.3.0. If not
-   explicitly specified, a deprecation warning is now produced every
+   argument `ties.method` is deprecated since version 1.3.0 [2024-04-10].
+   If not explicitly specified, a deprecation warning is now produced every
    25:th call not specifying the `ties.method` argument.
    
 
diff --git a/R/options.R b/R/options.R
index b5cca7f5..53c18ab3 100644
--- a/R/options.R
+++ b/R/options.R
@@ -54,7 +54,7 @@
 #' \describe{
 #'  \item{\option{matrixStats.ties.method.freq}:}{(numeric)
 #'    Controls how often the above validation is checked.
-#'    (Default: \code{25} - every 25:th call starting with the first)}
+#'    (Default: \code{10} - every 10:th call starting with the first)}
 #' }
 #'
 #' @section Environment variables that set R options:
@@ -203,5 +203,5 @@ update_package_options <- function() {
   
   update_package_option("matrixStats.ties.method.missing", default = if (getRversion() >= "4.4.0") "deprecated" else "ignore", choices = c("deprecated", "defunct", "ignore"))
 
-  update_package_option("matrixStats.ties.method.freq", mode = "numeric", default = "25")
+  update_package_option("matrixStats.ties.method.freq", mode = "numeric", default = "10")
 }
diff --git a/man/matrixStats.options.Rd b/man/matrixStats.options.Rd
index d1946df4..0bce83fa 100644
--- a/man/matrixStats.options.Rd
+++ b/man/matrixStats.options.Rd
@@ -73,7 +73,7 @@ Below are the \R options and environment variables that are used by the
 \describe{
  \item{\option{matrixStats.ties.method.freq}:}{(numeric)
    Controls how often the above validation is checked.
-   (Default: \code{25} - every 25:th call starting with the first)}
+   (Default: \code{10} - every 10:th call starting with the first)}
 }
 }