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This repository has been archived by the owner on Dec 12, 2023. It is now read-only.
@AshirBorah has some ideas for assigning empirical p-values relative to negative control guides/oligos, we can discuss it here and implement it moving forward.
The text was updated successfully, but these errors were encountered:
Current method:
https://screenpro2.readthedocs.io/en/latest/PhenoScore.html
@mhorlbeck used Mann–Whitney U test in https://github.com/mhorlbeck/ScreenProcessing. The t-test approach here was originally extracted from @hanig's notebook in which he processed a V3 screen for his lab.
@AshirBorah has some ideas for assigning empirical p-values relative to negative control guides/oligos, we can discuss it here and implement it moving forward.
The text was updated successfully, but these errors were encountered: