run-tests.yml

# This workflow will install Python dependencies, run tests, lint, and perform static code analysis
# All unit tests found in the tests/ directory are run.
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Run tests

on: push

jobs:
  linting-flake8:
    name: Lint Python with flake8
    runs-on: ubuntu-latest
    steps:
      - name: Checkout github repo
        uses: actions/checkout@v2
      - name: Install flake8
        run: |
          python -m pip install flake8==7.1.0 flake8-docstrings==1.7.0 flake8-annotations==3.1.1
      - name: Run lint with flake8
        run: |
          flake8 src floodresilience

  linting-pylint:
    name: Lint Python with pylint
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -l {0}
    steps:
      - name: Checkout github repo
        uses: actions/checkout@v2
      - name: Install package dependencies
        uses: mamba-org/setup-micromamba@v1
        with:
          environment-file: environment.yml
          # only cache environment
          cache-environment: true
          cache-downloads: false
      - run: |
          conda info
          conda list
          conda config --show-sources
          conda config --show
      - name: Install pylint
        run: |
          python -m pip install pylint==3.2.6
      - name: Run lint with pylint
        run: |
          pylint src floodresilience

  unit-tests:
    name: Run unit tests with pytest
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -l {0}
    steps:

      - name: Checkout github repo including lfs files
        uses: actions/checkout@v2
        with:
          lfs: true

      - name: Install package dependencies
        uses: mamba-org/setup-micromamba@v1
        with:
          environment-file: environment.yml
          # only cache environment
          cache-environment: true
          cache-downloads: false
      - run: |
          conda info
          conda list
          conda config --show-sources
          conda config --show

      - name: Create .env file with API keys
        env:
          ENV_BASE64: ${{ secrets.ENV_BASE64 }}
        run: |
          echo import .env file from secrets and regenerate the file
          echo $ENV_BASE64 | base64 -d > .env

      - name: Run tests with pytest
        env:
          TEST_DATABASE_INTEGRATION: "false"
        run: |
          pytest

  sonarcloud:
    name: Run static-code analysis on SonarCloud
    runs-on: ubuntu-latest
    steps:
      - name: Checkout github repo
        uses: actions/checkout@v2
        with:
          fetch-depth: 0
      - name: SonarCloud Scan
        uses: SonarSource/sonarcloud-github-action@master
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
          SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}