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TypeError: Cannot read property 'lstat' of undefined #1440

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ZWanBing opened this issue Nov 13, 2020 · 5 comments · Fixed by #1461
Closed

TypeError: Cannot read property 'lstat' of undefined #1440

ZWanBing opened this issue Nov 13, 2020 · 5 comments · Fixed by #1461
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@ZWanBing
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Hey guys!
I met with an error when adding the reference genome as below:
image
How to deal with this?
jbrowse add-assembly ~/hg19.fa --load copy generate an error:
TypeError: Cannot read property 'lstat' of undefined
Many thanks for any help!

@ZWanBing ZWanBing added the bug Something isn't working label Nov 13, 2020
@garrettjstevens
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Hi, can you tell us what your JBrowse CLI version (jbrowse --version) and node version (node --version) are?

@garrettjstevens
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To add a bit to that, the JBrowse CLI requires Node v10 or higher.

@ZWanBing
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Hi, can you tell us what your JBrowse CLI version (jbrowse --version) and node version (node --version) are?

Hi,the version of my JBrowse CLI version is 1.0.0,and the version of node.js is v10.9.0
image
Dose this version meet the configuration requirements?

@cmdcolin
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@ZWanBing I did a quick look into this and it seems that currently 10.9 has the error. Obtaining a newer version of the 10.x branch would work better probably

I looked into a fix here #1461 that fixes 10.9. This is not yet released yet but could help if you require on 10.9....if so let us know and we can speed up a release

@ZWanBing
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@cmdcolin I have installed the v14.15.0 version and it works well. Thanks for your help and I don't require on 10.9 now so you can release the fix according to your schedule.

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3 participants