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Browsing returns different region #61

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andreaminio opened this issue Nov 10, 2017 · 0 comments
Open

Browsing returns different region #61

andreaminio opened this issue Nov 10, 2017 · 0 comments

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@andreaminio
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andreaminio commented Nov 10, 2017

I have this problem I cannot find any answer on the net. I setup a GB2 with mysql for a draft genome and its gene annotation. When I browse it, no matter what region I ask I'm given a different one shifted several kilobases downstream, annotation seems correct in structure (when I get manually to the region of interest) but when I ask for the sequence of the gene it returns the bases form the shifted region instead (even if the structure intron/exon is in line with the annotation). Any clue on how make it work?

[EDIT]

I just figured out that also chromosome length is returned wrong from the sistem

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