From 7e76ec750a47e69b9ecc3bc8352b1eb81835a70a Mon Sep 17 00:00:00 2001
From: Jordan S Read <jread@usgs.gov>
Date: Mon, 9 Mar 2015 12:45:06 -0500
Subject: [PATCH] v0.6.2 GRAN checks addressed

---
 DESCRIPTION              |  2 +-
 R/generic_metrics.R      |  6 ++++++
 R/read_field_stage.R     |  6 ++----
 man/plot_meteo.Rd        |  2 +-
 man/read_field_stage.Rd  |  2 ++
 man/water.temperature.Rd | 22 ++++++++++++++++++++++
 6 files changed, 34 insertions(+), 6 deletions(-)
 create mode 100644 man/water.temperature.Rd

diff --git a/DESCRIPTION b/DESCRIPTION
index fd1767d..ef0bcd1 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: glmtools
 Type: Package
 Title: glmtools
-Version: 0.6.1
+Version: 0.6.2
 Date: 2013-09-18
 Author: Jordan S Read, Luke A Winslow
 Maintainer: Jordan S Read <jread@usgs.gov>
diff --git a/R/generic_metrics.R b/R/generic_metrics.R
index ab20966..79636ef 100644
--- a/R/generic_metrics.R
+++ b/R/generic_metrics.R
@@ -1,4 +1,10 @@
 #holder for glmtools metrics that follow rLA conventions
+#'@title mimic rLakeAnalyzer function
+#'@details used to mimic an rLakeAnalyzer function, so that it will 
+#'be recognized by a call to \code{\link{sim_metrics}}
+#'@param wtr a water temperature data.frame
+#'
+#'@seealso \code{\link{sim_metrics}}, \code{\link{compare_to_field}}, \code{\link{validate_sim}}
 #'@export
 water.temperature <- function(wtr){
   wtr
diff --git a/R/read_field_stage.R b/R/read_field_stage.R
index c5445e5..c62f1b3 100644
--- a/R/read_field_stage.R
+++ b/R/read_field_stage.R
@@ -2,16 +2,14 @@
 #'@title Read in a field stage file
 #'
 #'@param file Path to stage TSV or CSV file
-#'
+#'@details
+#'will read file from an assumed standard format.
 #'@description
 #'Reads a field file for stage. Field file must be either
 #'a TSV (tab separated) or CSV (comma separated) file with 
 #'columns named "datetime" and "stage" (in meters). Datetime
 #'format must be yyyy-mm-dd
-#'
-#'
 #'@author Luke Winslow
-#'
 #'@examples
 #'
 #'field_file = system.file('extdata/field_stage.csv', 
diff --git a/man/plot_meteo.Rd b/man/plot_meteo.Rd
index 568202f..82d0c34 100644
--- a/man/plot_meteo.Rd
+++ b/man/plot_meteo.Rd
@@ -24,7 +24,7 @@ plot_meteo(nml_file)
 Jordan S. Read, Luke A. Winslow
 }
 \seealso{
-\link{read_nml}
+\code{\link{read_nml}}
 }
 \keyword{methods}
 
diff --git a/man/read_field_stage.Rd b/man/read_field_stage.Rd
index 7be5c76..df1da7e 100644
--- a/man/read_field_stage.Rd
+++ b/man/read_field_stage.Rd
@@ -17,6 +17,8 @@ format must be yyyy-mm-dd
 }
 \details{
 
+
+will read file from an assumed standard format.
 }
 \examples{
 field_file = system.file('extdata/field_stage.csv',
diff --git a/man/water.temperature.Rd b/man/water.temperature.Rd
new file mode 100644
index 0000000..ab17d95
--- /dev/null
+++ b/man/water.temperature.Rd
@@ -0,0 +1,22 @@
+% Generated by roxygen2 (4.1.0): do not edit by hand
+% Please edit documentation in R/generic_metrics.R
+\name{water.temperature}
+\alias{water.temperature}
+\title{mimic rLakeAnalyzer function}
+\usage{
+water.temperature(wtr)
+}
+\arguments{
+\item{wtr}{a water temperature data.frame}
+}
+\description{
+mimic rLakeAnalyzer function
+}
+\details{
+used to mimic an rLakeAnalyzer function, so that it will
+be recognized by a call to \code{\link{sim_metrics}}
+}
+\seealso{
+\code{\link{sim_metrics}}, \code{\link{compare_to_field}}, \code{\link{validate_sim}}
+}
+