pyproject.toml

[build-system]
requires = ["hatchling>=1.8.0", "hatch-vcs"]
build-backend = "hatchling.build"

[tool.hatch.version]
path = "src/excited_workflow/__init__.py"

[project]
name = "excited-workflow"
description = " A Machine Learning workflow to produce a dataset of global net ecosystem CO2 exchange fluxes."
readme = "README.md"
license = "Apache-2.0"
requires-python = ">=3.10, <3.12"
authors = [
  {email = "b.schilperoort@esciencecenter.nl"},
  {name = "Bart Schilperoort, Yang Liu, Claire Donnelly"}
]
maintainers = [
  {name = "Bart Schilperoort", email = "b.schilperoort@esciencecenter.nl"},
  {name = "Yang Liu", email = "y.liu@esciencecenter.nl"},
  {name = "Claire Donnelly", email = "c.donnelly@esciencecenter.nl"}
]
keywords = [
  "machine learning",
  "co2 exchange",
  "NEE",
  "GPP",
]
classifiers = [
  "Development Status :: 2 - Pre-Alpha",
  "Intended Audience :: Developers",
  "License :: OSI Approved :: Apache Software License",
  "Natural Language :: English",
  "Operating System :: OS Independent",
  "Programming Language :: Python",
  "Programming Language :: Python :: 3 :: Only",
  "Programming Language :: Python :: 3.10",
  "Programming Language :: Python :: 3.11",
]
dependencies = [
    "scikit-learn==1.2.2",
    "lightgbm==3.3.5",
    "pandas",
    "openpyxl", # Excel file compatibility.
    "xarray",
    "dask[distributed]",
    "bokeh<3",
    "netcdf4",
    "matplotlib",
    "pyyaml",
    "timezonefinder",
    "skl2onnx",
    "onnxruntime",
    "onnxmltools",
    "flox", # Makes xarray groupby (and resample) faster.
    "bottleneck", # required for some xarray functionality.
    "xarray-regrid",
    "pycaret",
]
dynamic = ["version"]

[project.optional-dependencies]
dev = [
  "ruff",
  "mypy",
  "types-PyYAML",
]
docs = [
    "mkdocs",
    "mkdocs-material",
    "mkdocs-gen-files",
    "mkdocs-jupyter",
]

[tool.ruff]
select = ["E", "F", "B", "D", "C90", "I", "N", "UP", "PLE", "PLR", "PLW"]
extend-select = ["D401", "D400", "D404", "TID252"]
ignore = ["PLR2004", "PLR0913", "N813", "N803"]
# Allow unused variables when underscore-prefixed.
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
target-version = "py310"
line-length = 88
exclude = ["docs", "build"]

[tool.ruff.per-file-ignores]
"tests/**" = ["D"]

[tool.ruff.pydocstyle]
convention = "google"

[tool.ruff.isort]
known-first-party = ["excited_workflow"]
force-single-line = true
lines-after-imports = 2

[tool.mypy]
python_version = "3.10"
plugins = "numpy.typing.mypy_plugin"
disallow_untyped_defs = true
disallow_any_unimported = false
no_implicit_optional = true
check_untyped_defs = true
warn_return_any = true
warn_unused_ignores = true
show_error_codes = true
ignore_missing_imports = true