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Remove UTRs #405

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homonecloco opened this issue May 24, 2021 · 2 comments
Closed

Remove UTRs #405

homonecloco opened this issue May 24, 2021 · 2 comments

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@homonecloco
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I found another issue in the utilities.

% remove_utrs.py -f gff3 TraesCS1A02G418200.gff3 TraesCS1A02G418200_no_utr.gff3
Traceback (most recent call last):
  File "/usr/local/bin/remove_utrs.py", line 13, in <module>
    def strip_utr(gene: Mikado.loci.Gene):
AttributeError: module 'Mikado' has no attribute 'loci'
@lucventurini
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Instead of
import Mikado

import Mikado.loci
import Mikado.parsers

should solve the issue in that script.

@ljyanesm
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Fixed in 2.3.0

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3 participants