CalrissianJob-revsort-single-default-container.yaml

---
apiVersion: batch/v1
kind: Job
metadata:
  name: calrissian-revsort-single-default-container
spec:
  template:
    spec:
      containers:
      - name: calrissian
        image: dukegcb/calrissian:latest
        securityContext:
          runAsUser: 1000
          runAsGroup: 1000
        command: ["calrissian"]
        args:
          - "--default-container"
          - "debian:stretch-slim"
          - "--max-ram"
          - "16G"
          - "--max-cores"
          - "8"
          - "--tmp-outdir-prefix"
          - "/calrissian/tmpout/"
          - "--outdir"
          - "/calrissian/output-data/"
          - "/calrissian/input-data/revsort-single-no-docker.cwl"
          - "/calrissian/input-data/revsort-single-job.json"
        volumeMounts:
        - mountPath: /calrissian/input-data
          name: calrissian-input-data
          readOnly: true
        - mountPath: /calrissian/tmpout
          name: calrissian-tmpout
        - mountPath: /calrissian/output-data
          name: calrissian-output-data
        env:
        - name: CALRISSIAN_POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
      restartPolicy: Never
      volumes:
      - name: calrissian-input-data
        persistentVolumeClaim:
          claimName: calrissian-input-data
          readOnly: true
      - name: calrissian-tmpout
        persistentVolumeClaim:
          claimName: calrissian-tmpout
      - name: calrissian-output-data
        persistentVolumeClaim:
          claimName: calrissian-output-data