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params1.txt
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params1.txt
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end_time 3
pulses 1
n_enzymes 50
n_substrates 12
n_uptake 14
n_taxa 100
Enzyme_Loss_Rate 0.04
Death_Rate 0.001
Death_Ratio 0.2
set.seed 1
seed 150703085521
Tol_CUE 0
Tol_min 0
Tol_max 0
Vmax_Km 1
Vmax_Km_int 0
Uptake_Vmax_Km 0.2
Uptake_Vmax_Km_int 0
Km_error 0
Specif_factor 1
uptake_prob 1
CUE_ref 0.5
CUE_temp -0.016
CUE_enz 0
CUE_uptake 0
Vmax0_min 5
Vmax0_max 50
Uptake_Vmax0_min 1
Uptake_Vmax0_max 10
Uptake_Ea_min 35
Uptake_Ea_max 35
Km_Ea 20
Km_min 0.01
Uptake_Km_min 0.001
LCI_slope -0.8
NormalizeProd 0
NormalizeUptake 0
Enzymes_per_sub 1
Avg_extra_req_enz 0
Uptake_per_monomer 1
Enz_per_taxon_min 0
Enz_per_taxon_max 40
Cfrac_b 0.825
Nfrac_b 0.16
Pfrac_b 0.015
Cfrac_f 0.9
Nfrac_f 0.09
Pfrac_f 0.01
Crange 0.09
Nrange 0.04
Prange 0.005
Enz_Prod_min 0.00001
Enz_Prod_max 0.0001
Constit_Prod_min 0.00001
Constit_Prod_max 0.0001
Enz_C_cost 1
Enz_N_cost 0.3
Enz_P_cost 0
Enz_Maint_cost 5
Uptake_C_cost_min 0.01
Uptake_C_cost_max 0.1
Uptake_Maint_cost 0.01
Monomer_Substrate_Ratio 0
Init_NH4 0
Init_PO4 0
Input_NH4 0
Input_PO4 0
Leaching 0.1
Enz_min 0
Enz_max 0
x 10
y 10
taxa_per_box 0.01
dist 1
max_size_b 2
max_size_f 50
C_min 0.086
N_min 0.012
P_min 0.002
fb 0.5
direct 0.95
beta.bac 10
beta.fungi 10
Psi.slope.leach 0.5
Psi.slope.Vmax 0.25
Psi.slope.uptake 0.5
output.mid 0
print.grid 30