README.md

ReproRehab 2022

Sook-Lei Liew (sliew@usc.edu), James M. Finley (jmfinley@pt.usc.edu), Keith Lohse (Keith.Lohse@health.utah.edu) , David Kennedy (david.kennedy@umassmed.edu), Jean-Baptiste Poline (jbpoline@gmail.com)

This github repository has information and materials for the ReproRehab program. If you're new to github, you can click the "clone or download" button on this repository to download a zip file.

SCHEDULE

WEEKS 1 - 3: EVERYONE

Oct 10 - Week 1: Intro to ReproRehab

Why do we need reproducible methods in rehabilitation? Overview and principles of reproducible science. (Slack, Github)

• ReproRehab All Hands Meeting, Pods meeting

• Week 1: Welcome to ReproRehab https://youtu.be/lz5U9nwPIjo
• Week 1: Principles of Reproducible Science https://youtu.be/rJTuXA9kaT4
• Week 1: ReproRehab Housekeeping https://youtu.be/VbWHaAOizic
• Week 1: Meet your 2022-2023 ReproRehab Leadership Team and TAs https://youtu.be/NIzDs0IbAxo

Oct 17 - Week 2: Reproducible Data Management/Organization

Basics of data organization, file formatting, naming for machine-readable data, meta- data. How to approach research questions with reproducibility in mind.

• Pods meeting

• Week 2: Intro to Reproducible Principles for Data Analysis and Management https://youtu.be/jn2ZA00ePAg
• Week 2: Introduction to Data Analysis https://youtu.be/13IuiwPAPUY
• Week 2: Data Standardization: A (very) short introduction https://youtu.be/pPL_sASvKbQ
• Week 2: DataLad Introduction (optional but highly recommended) https://www.youtube.com/watch?v=40ZcGp2vHXk

Oct 24 - Week 3: Open Datasets

FAIR data principles, open-source datasets, data transfer agreements, and ReproRehabDB (our database for courses/open datasets).

• Pods meeting

• Video content forthcoming

WEEKS 4-7: POD-SPECIFIC CONTENT

For these four weeks, pods will select a curriculum based on learner’s needs.

ReproRehab will provide introductory and/or intermediate course curricula with asynchronous videos and hands-on exercises in Matlab, R, and/or python, as well as on data archiving, data management, and more (and pods are welcome to chose course content from outside sources as well).

Oct 31 - Week 4

• Pods meeting

Nov 7 - Week 5

• Pods, SFN meet-up

Nov 14 - Week 6

• Pods meeting

Nov 21 - No class, Thanksgiving Break

Nov 28 - Week 7

• Pods meeting

WEEKS 8 - 24: EVERYONE

Dec 5 - Week 8: Launching into self-guided learning

What types of online learning opportunities are available to rehabilitation researchers?

• ReproRehab All Hands Meeting, Pods meeting

Dec 12 - Apr 3: 4-MONTH SELF-GUIDED PROGRAM (Weeks 9-24)

Learning from online course materials and applying it to your own research; ASNR Meet-up

Apr 3 - Follow-up and evaluations (Week 24)

Presentations by Learners and TAs

• Final ReproRehab All Hands Meeting

STAY UP TO DATE

Follow us on Twitter: @reprorehab

Website: https://www.reprorehab.usc.edu/