From f03d442ce7bf66e523fc2348f27a90ab0bc46949 Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Tue, 7 May 2024 10:50:01 -0700 Subject: [PATCH 1/5] JupyterBook 1.0 --- environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/environment.yml b/environment.yml index 912514f..745ab36 100644 --- a/environment.yml +++ b/environment.yml @@ -34,7 +34,7 @@ dependencies: - ipython~=8.20.0 - ipywidgets~=8.1.1 - jupyter-ai~=2.9.1 - - jupyter-book~=0.15.1 + - jupyter-book~=1.0.0 # - jupyter-offlinenotebook~=0.2.2 # Outdated according to jupyterlab # - jupyter-collaboration~=2.0.1 - jupyterlab-favorites~=3.2.1 From 8b7ed5460f458f5c24cdb526b789709be12cb860 Mon Sep 17 00:00:00 2001 From: actions-bot <58130806+actions-bot@users.noreply.github.com> Date: Tue, 7 May 2024 17:53:16 +0000 Subject: [PATCH 2/5] [condalock-command] autogenerated conda-lock files --- conda-linux-64.lock | 349 ++++++++++++++++++++++---------------------- 1 file changed, 175 insertions(+), 174 deletions(-) diff --git a/conda-linux-64.lock b/conda-linux-64.lock index 8bf6f08..56652c8 100644 --- a/conda-linux-64.lock +++ b/conda-linux-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: 4ae3b7d1734a3b47bd33967a63a4de08962ee673e38152099aee7efccd033e83 +# input_hash: e138419c6d76dad67091d44e32d14886d7f153f8da979a30664a95df68dd3e30 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef @@ -8,25 +8,25 @@ https://conda.anaconda.org/conda-forge/linux-64/dcw-gmt-2.1.2-ha770c72_0.conda#1 https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2#0c96522c6bdaed4b1566d11387caaf45 https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2#34893075a5c9e55cdafac56607368fc6 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https://conda.anaconda.org/conda-forge/noarch/intake-xarray-0.6.1-pyhd8ed1ab_0.tar.bz2#6cc318952c249b55ae83f8a994342672 https://conda.anaconda.org/conda-forge/noarch/intake-stac-0.4.0-pyhd8ed1ab_0.tar.bz2#d9a48c97623dc88751dbd266b89497e3 -https://conda.anaconda.org/conda-forge/noarch/myst-parser-0.18.1-pyhd8ed1ab_0.tar.bz2#bcfdf5c7d8bf5c6f6be7b4c66fff2eca -https://conda.anaconda.org/conda-forge/noarch/myst-nb-0.17.2-pyhd8ed1ab_0.conda#40190b7d06f86b63d28fa78aaa39c023 +https://conda.anaconda.org/conda-forge/noarch/myst-parser-1.0.0-pyhd8ed1ab_0.conda#e559708feb0aed1ae24c518e569ea3eb +https://conda.anaconda.org/conda-forge/noarch/myst-nb-1.1.0-pyhd8ed1ab_0.conda#bac818b87e5f0dace7bec63ec7ec8e72 https://conda.anaconda.org/conda-forge/noarch/pydata-sphinx-theme-0.15.2-pyhd8ed1ab_0.conda#ce99859070b0e17ccc63234ca58f3ed8 -https://conda.anaconda.org/conda-forge/noarch/sphinx-book-theme-1.0.1-pyhd8ed1ab_0.conda#1ef419576de2c51b6e3a5a393eb35cda 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+https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-bibtex-2.6.2-pyhd8ed1ab_0.conda#ac0947374ec8b703181808828bf5dfec +https://conda.anaconda.org/conda-forge/noarch/jupyter-book-1.0.0-pyhd8ed1ab_0.conda#0f03c3aa37353190728ac39434a69a98 https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-devhelp-1.0.6-pyhd8ed1ab_0.conda#d7e4954df0d3aea2eacc7835ad12671d https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-htmlhelp-2.0.5-pyhd8ed1ab_0.conda#7e1e7437273682ada2ed5e9e9714b140 https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-qthelp-1.0.7-pyhd8ed1ab_0.conda#26acae54b06f178681bfb551760f5dd1 -https://conda.anaconda.org/conda-forge/noarch/sphinx-5.0.2-pyh6c4a22f_0.tar.bz2#d4eaa1f50733a377480ce1d5aac556c7 +https://conda.anaconda.org/conda-forge/noarch/sphinx-5.1.1-pyhd8ed1ab_1.tar.bz2#cd1129e88f6278787212624e1b7a8001 https://conda.anaconda.org/conda-forge/noarch/sphinxcontrib-serializinghtml-1.1.10-pyhd8ed1ab_0.conda#e507335cb4ca9cff4c3d0fa9cdab255e # pip jupyter-desktop-server @ https://files.pythonhosted.org/packages/15/df/6f249cd3c3db684c8f9e67bc5470c4b593f882fbb03b1649f72ae7a26566/jupyter-desktop-server-0.1.3.tar.gz#sha256=5915a2dbbe250f59b3cc01859297b26b2e1836e03a5db4bfbfd438005649d7e4 From 39862ce1ac79fdd394526a1848c8985203ed5d41 Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Tue, 7 May 2024 13:24:19 -0700 Subject: [PATCH 3/5] bump jupyterlab-myst --- environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/environment.yml b/environment.yml index 745ab36..d413c49 100644 --- a/environment.yml +++ b/environment.yml @@ -41,7 +41,7 @@ dependencies: - jupyterlab-geojson~=3.4.0 - jupyterlab-git~=0.50.0 - jupyterlab-h5web~=11.1.0 - - jupyterlab-myst~=2.1.0 + - jupyterlab-myst~=2.4.2 # - jupyterlab-plotly~=5.18.0 # Outdated accoring to jupyterlab - jupyterlab_pygments~=0.3.0 # To bring extension uptodate - jupytext~=1.16.1 From ecf22cdbca0dcf91792c7368213dd9f124967fcb Mon Sep 17 00:00:00 2001 From: Scott Henderson Date: Tue, 7 May 2024 13:26:40 -0700 Subject: [PATCH 4/5] add sphinxcontrib-bibtex --- environment.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/environment.yml b/environment.yml index d413c49..3584d99 100644 --- a/environment.yml +++ b/environment.yml @@ -47,6 +47,8 @@ dependencies: - jupytext~=1.16.1 - nbconvert==6.5.3 - nbdime~=4.0.1 + # JupyterBook Addons + - sphinxcontrib-bibtex # Core scientific python stack - cython==0.29.32 # optimization, C API access From 9464ba916f8cc11c17be11afb5d904f0af710e90 Mon Sep 17 00:00:00 2001 From: actions-bot <58130806+actions-bot@users.noreply.github.com> Date: Tue, 7 May 2024 20:28:17 +0000 Subject: [PATCH 5/5] [condalock-command] autogenerated conda-lock files --- conda-linux-64.lock | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/conda-linux-64.lock b/conda-linux-64.lock index 56652c8..35bd51f 100644 --- a/conda-linux-64.lock +++ b/conda-linux-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: e138419c6d76dad67091d44e32d14886d7f153f8da979a30664a95df68dd3e30 +# input_hash: 6772174c923c8e24535de0be16fb8fa256d3afe3d14c0d1f2339de2e7f357519 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef @@ -254,7 +254,6 @@ https://conda.anaconda.org/conda-forge/noarch/json5-0.9.25-pyhd8ed1ab_0.conda#5d https://conda.anaconda.org/conda-forge/linux-64/jsonpointer-2.4-py311h38be061_3.conda#41d52d822edf991bf0e6b08c1921a8ec https://conda.anaconda.org/conda-forge/noarch/jupyterlab-favorites-3.2.2-pyhd8ed1ab_0.conda#00df6734cc8acc759ca7f59ad64651df https://conda.anaconda.org/conda-forge/noarch/jupyterlab-geojson-3.4.0-pyhd8ed1ab_0.conda#a98e9b2a8648b246b9aec4a67cfea5f7 -https://conda.anaconda.org/conda-forge/noarch/jupyterlab-myst-2.1.0-pyhd8ed1ab_0.conda#01b3067af472c554a7b5f756fda53224 https://conda.anaconda.org/conda-forge/noarch/jupyterlab_widgets-3.0.10-pyhd8ed1ab_0.conda#16b73b2c4ff7dda8bbecf88aadfe2027 https://conda.anaconda.org/conda-forge/linux-64/kiwisolver-1.4.5-py311h9547e67_1.conda#2c65bdf442b0d37aad080c8a4e0d452f https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.16-hb7c19ff_0.conda#51bb7010fc86f70eee639b4bb7a894f5 @@ -693,6 +692,7 @@ https://conda.anaconda.org/conda-forge/noarch/jupyter-resource-usage-1.0.2-pyhd8 https://conda.anaconda.org/conda-forge/noarch/jupyter-server-mathjax-0.2.6-pyh5bfe37b_1.conda#11ca195fc8a16770661a387bcce27c36 https://conda.anaconda.org/conda-forge/noarch/jupyter-server-proxy-4.1.2-pyhd8ed1ab_0.conda#3671520b52215a5a084de08003e6d8cd https://conda.anaconda.org/conda-forge/noarch/jupyterlab-h5web-11.1.0-pyhd8ed1ab_0.conda#7a24c2d8f78dcb2edf72ac3405637308 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