-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathCOVID-aca.html
301 lines (226 loc) · 10.5 KB
/
COVID-aca.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
<!doctype html>
<html class="no-js" lang="zxx">
<head>
<meta charset="utf-8">
<meta http-equiv="x-ua-compatible" content="ie=edge">
<title>COVID-19 Academic Graph</title>
<meta name="description" content="">
<meta name="viewport" content="width=device-width, initial-scale=1">
<!-- <link rel="manifest" href="site.webmanifest"> -->
<link rel="shortcut icon" type="image/x-icon" href="img/favicon.png">
<!-- Place favicon.ico in the root directory -->
<!-- CSS here -->
<link rel="stylesheet" href="css/bootstrap.min.css">
<link rel="stylesheet" href="css/owl.carousel.min.css">
<link rel="stylesheet" href="css/magnific-popup.css">
<link rel="stylesheet" href="css/font-awesome.min.css">
<link rel="stylesheet" href="css/themify-icons.css">
<link rel="stylesheet" href="css/nice-select.css">
<link rel="stylesheet" href="css/flaticon.css">
<link rel="stylesheet" href="css/gijgo.css">
<link rel="stylesheet" href="css/animate.css">
<link rel="stylesheet" href="css/slick.css">
<link rel="stylesheet" href="css/slicknav.css">
<link rel="stylesheet" href="https://ajax.googleapis.com/ajax/libs/jqueryui/1.11.2/themes/smoothness/jquery-ui.css">
<link rel="stylesheet" href="css/style.css">
<!-- <link rel="stylesheet" href="css/responsive.css"> -->
</head>
<body>
<!--[if lte IE 9]>
<p class="browserupgrade">You are using an <strong>outdated</strong> browser. Please <a href="https://browsehappy.com/">upgrade
your browser</a> to improve your experience and security.</p>
<![endif]-->
<!-- header-start -->
<header>
<div class="header-area">
<div id="sticky-header" class="main-header-area">
<div class="container-fluid ">
<div class="header_bottom_border">
<div class="row align-items-center">
<div class="col-xl-3 col-lg-2">
<div class="logo">
<a href="index.html">
<span><img src = "img/logoNew.png" width = "80px" height = "40" ></span>
<p style="color:whitesmoke;"> CWRU Database Group</p>
</a>
</div>
</div>
<div class="col-xl-6 col-lg-7">
<div class="main-menu d-none d-lg-block">
<nav>
<ul id="navigation">
<li><a href="index.html">Home</a></li>
<li><a href="group.html">People</a></li>
<li><a href="proj.html">Research</a></li>
<li><a href="courses.html">Courses</a></li>
<li><a href="resources.html">Resources</a></li>
<li><a href="contact.html">Contact</a></li>
</ul>
</nav>
</div>
</div>
<div class="col-12">
<div class="mobile_menu d-block d-lg-none"></div>
</div>
</div>
</div>
</div>
</div>
</div>
</header>
<!-- header-end -->
<!-- bradcam_area -->
<div class="slider_area_shrink">
<div class="single_slider single_slider_area_shrink d-flex align-items-center">
</div>
</div>
<!--/ bradcam_area -->
<!-- counter_area -->
<!--/ counter_area -->
<!-- team_area -->
<div class="team_area">
<div class="container">
<div class="section_title mb-40 text-center">
<h3>
COVID-19 Academic Graph
</h3>
</div>
<p>This COVID-19 academic graph dataset is generated based on the <a
href="https://pages.semanticscholar.org/coronavirus-research">COVID-19 Open Research Dataset</a> created
by <a href="https://allenai.org/">Allen Institute for AI</a>. Based on the 2020-03-27 release which contains
33000 full text articles, we created a citation network and a semantic network. </p>
<h4> COVID-19 Citation Network </h4>
<p>By filtering the paper with missing title or author information, we get in total 28,757 papers (in JSON
format) and construct two citation networks. The core network contains the author and citation information
of these 28,757 papers only, while the complete network contains the papers cited by these 28,757 papers and
their authors. The details of these two networks are shown below.
<center>
<table border="1" width="400" align="center">
<tr>
<td> Datasets</td>
<td> Core</td>
<td> Complete</td>
</tr>
<tr>
<td># of nodes</td>
<td>181,166</td>
<td>2,223,994</td>
</tr>
<tr>
<td> type:paper</td>
<td>28,757</td>
<td>1,132,472</td>
</tr>
<tr>
<td>type:author</td>
<td>152,409</td>
<td>1,091,522</td>
</tr>
<tr>
<td># of edges</td>
<td>233,556</td>
<td>6,431,265</td>
</tr>
<tr>
<td> type:isWrittenBy</td>
<td>193,525</td>
<td>4,684,141</td>
</tr>
<tr>
<td>type:isCitedBy</td>
<td>40,031</td>
<td>1,747,124</td>
</tr>
</table>
</center>
</p>
<p>Each network contains two files, the node and the edge file, both contain triples separated by "\t". Each
triple in the node file is in the format of (nodeID, node attribute name, attribute value). For <i>paper</i>
nodes, we include the <i>title</i> information and the link to its original JSON file, i.e. <i>fileName</i>.
Similarly, for <i>author</i> nodes, we include their <i> firstname</i>, <i>lastname</i> and
<i>affiliation</i>. Each triple in the edge file is in the format of (nodeID, edge type, nodeID).
</p>
<h4>COVID-19 Semantic Network</h4>
<p>
By extracting the full text of each paper and leveraging <a
href="https://nlp.stanford.edu/software/openie.html#Download">OpenIE</a>,
we generate a semantic graph that contains COVID-related information. The graph
<i>COVID-academic-semantic</i> contains in total 46,020,975 triples, which includes 17,666,478 entities and
1,778,310 types of relations. For each triple, we associate the original paper file name that the triple is
generated from.
<br>
Additionaly, we use <a href=https://cogcomp.seas.upenn.edu/page/demo_view/Wikifier>Wikifier</a> to identify
the entities and link them to Wiki pages. We found that 150,176 entities can be identified.
</p>
<h4>Download Link</h4>
<p>
Citation network - core [<a
href="https://drive.google.com/file/d/1r4BZG6ByGg4b2Er8wX_dAWO24uE1U_Q9/view?usp=sharing">COVID-academic-core.zip</a>]
<br>
Citation network - complete [<a
href="https://drive.google.com/file/d/1NsdqGAohp_F4xmXTD2khStNIjZBtEGhx/view?usp=sharing">COVID-academic-complete.zip</a>]
<br>
Semantic network [<a
href="https://drive.google.com/file/d/19xfDkql1re8qTzkQHOIt_Q2_0MfI8bRE/view?usp=sharing">COVID-academic-semantic.zip</a>]
<br>
Semantic network - Wiki entities [<a
href="https://drive.google.com/file/d/1LDHr-pb9eUW00edAZUueKcsHmpKwPigS/view?usp=sharing">COVID-academic-semantic-entity-wiki.zip</a>]
</p>
<!--
<h2>Acknowledgements</h2>
<p>This project is supported in part by NSF IIS-1633629 and Google Faculty Research Award.</p>
-->
</div>
</div>
<!-- /team_area -->
<!-- testimonial_area -->
<!-- footer start -->
<footer class="footer">
<div class="copy-right_text">
<div class="container">
<div class="footer_border"></div>
<div class="row">
<div class="col-xl-12">
<p class="copy_right text-center">
<!-- Link back to Colorlib can't be removed. Template is licensed under CC BY 3.0. -->
Copyright ©<script>document.write(new Date().getFullYear());</script>
All rights reserved | This website is powered <i class="fa fa-heart-o" aria-hidden="true"></i>
by <a href="https://colorlib.com" target="_blank">Colorlib</a>
<!-- Link back to Colorlib can't be removed. Template is licensed under CC BY 3.0. -->
</p>
</div>
</div>
</div>
</div>
</footer>
<!--/ footer end -->
<!-- link that opens popup -->
<!-- JS here -->
<script src="js/vendor/modernizr-3.5.0.min.js"></script>
<script src="js/vendor/jquery-1.12.4.min.js"></script>
<script src="js/popper.min.js"></script>
<script src="js/bootstrap.min.js"></script>
<script src="js/owl.carousel.min.js"></script>
<script src="js/isotope.pkgd.min.js"></script>
<script src="js/ajax-form.js"></script>
<script src="js/waypoints.min.js"></script>
<script src="js/jquery.counterup.min.js"></script>
<script src="js/imagesloaded.pkgd.min.js"></script>
<script src="js/scrollIt.js"></script>
<script src="js/jquery.scrollUp.min.js"></script>
<script src="js/wow.min.js"></script>
<script src="js/nice-select.min.js"></script>
<script src="js/jquery.slicknav.min.js"></script>
<script src="js/jquery.magnific-popup.min.js"></script>
<script src="js/plugins.js"></script>
<!-- <script src="js/gijgo.min.js"></script> -->
<script src="js/slick.min.js"></script>
<!--contact js-->
<script src="js/contact.js"></script>
<script src="js/jquery.ajaxchimp.min.js"></script>
<script src="js/jquery.form.js"></script>
<script src="js/jquery.validate.min.js"></script>
<script src="js/mail-script.js"></script>
<script src="js/main.js"></script>
</body>
</html>