CHANGELOG

## 0.9.1 - 2024-06-03
- maintenance release

## 0.9.0

## 0.8.0

## 0.7.0 - 2022-09-28

### Added
- Implement 4-peak fitting #167

## 0.6.1 - 2022-09-16

### Fixed
- Fix get_frequencies_by_time #165
- Fix evaluating files without calibration #166

## 0.6.0 - 2022-09-14

### Added
- Implement exporting 3D data #162

### Changed
- Fit Brillouin spectrum on frequency axis #158

### Fixed
- Fix parameter label in csv files #163

## 0.5.1 - 2022-09-02

### Fixed
- Correctly initialize setup on new file load #156

## 0.5.0 - 2022-09-02

### Added
- Also store Rayleigh peak shift #153
- Write scale bar to Brillouin Tiff file #154 #155

## 0.4.0 - 2022-08-29

### Added
- Allow to specify calibration temperature #143
- Export all peaks from multi-peak fits #146
- Also store peak fit offsets #150 #151
- Allow to get fits #152

### Changed
- Update scipy #142

### Fixed
- Handle indices as int when getting key #144
- Fix exporting fluorescence w/o scale calibration #145
- Don't overwrite bounds when setting peak number #148
- Don't fail to set regions w/o calibration #149

## 0.3.0 - 2022-08-17

### Added
- Allow to export all Brillouin parameters acquired #141

### Fixed
- Align export parameter names with rest of library #140

## 0.2.4 - 2022-08-12

### Fixed
- Don't fail on empty arc #138
- Fix issues with flake8 --exclude _version.py .5, lock scipy version #139

## 0.2.3 - 2022-07-01

### Fixed
- Fix exporting on macOS #135
- Resolve paths to ensure proper folder handling #137
- Minor cleanup of test_serializer.py #136

## 0.2.2 - 2022-06-29

### Fixed
- Explicitly import pdfpages to solve pyinstaller issue #134

## 0.2.1 - 2022-06-28

Re-release to trigger PyPi upload. No changes to 0.2.0.

## 0.2.0 - 2022-06-27

### Added
- Implement exporting Brillouin and fluorescence maps as images #116
- Implement exporting Brillouin data as CSV file #131
- Implement retrieving fluorescence images #115
- Compensate drift by shifting evaluate regions #114
- Allow to get image binning #123 and binning factor #124

### Changed
- Evaluate in the temporal order of acquisition #113
- Reduce code duplication #112
- Optimize calculation of get_arc_from_circle_phis #125
- Account for binning when extracting #127
- Allow to set all points at once when extracting #129
- Only update the positions for the given key #130

### Fixed
- Improve the spectra extraction #120 #132
- Ensure discretize_arc returns arc within image #121
- Only use linear frequency interpolation #122
- Don't crash finding all points on empty calibrations #128
- Don't crash evaluation when no spectra is returned #133

## 0.1.10 - 2022-05-12

### Changed
- Raise proper exceptions if source or session files are lacking #106 #111
- Improve exact circle calculation #108

### Fixed
- Don't fail hard for invalid circle fits #107
- Don't crash when changing number peaks during evaluation #109
- Don't fail hard for aborted measurements #110

## 0.1.9 - 2022-05-06

### Fixed
- Don't fail hard for values outside interpolation range #104
- Fix calculating and handling bounds #105

## 0.1.8 - 2022-05-03

### Added
- Support multi-peak fitting for measurement data #99 #102
- Adjust evaluation model to store multi-peak fit results #96
- Implement getting correct multi-peak fit data #97
- Add an example script for exporting 2D data #101

### Changed
- Interpolate to find index for given frequency #100
- Improve the calibration peak finding #103

## 0.1.7 - 2022-04-22

### Added
- Allow to set calibration frequencies #87
- Add functions to get image count #92
- Allow to sort calibration keys by time #93
- Add function to get expected calibration frequencies #95

### Changed
- Adjust required peak height to signal level #86

### Fixed
- Delete VIPA params when clearing calibration #88
- Fix issue when only one calibration sample is used #89
- Only clear correct fit, add test for FitSet #94

## 0.1.6 - 2022-04-11

### Fixed
- Better handle broken eval data files #85

## 0.1.5 - 2022-04-11

### Fixed
- Don't fail on empty repetitions #84

## 0.1.4 - 2022-03-22

### Fixed
- Bring back multiprocessing support #82

## 0.1.3 - 2022-03-21

### Fixed
- Improve circle fit for points on straight line #80
- Remove multiprocessing support for now #81

## 0.1.2 - 2022-03-15

### Fixed
- Maintain order or parameter keys #78

## 0.1.1 - 2022-03-15

### Added
- Provide session files for source files #74

### Fixed
- Ensure we always get the expected data shape #75

## 0.1.0 - 2022-03-14

### Added
- Implement getting results maps #70
- Save bmlab version in session file #71
- Allow to open session files directly #72

## 0.0.13 - 2022-02-21

### Fixed
- Fix lorentz fit for special case #68

## 0.0.12 - 2022-02-16

### Added
- Add example for standalone evaluation #61
- Allow finding peaks in extraction view for all calibrations #65
- Allow to rotate the image by negative number #67

### Changed
- Improve the peak finding for calibration spectra #63
- Code cleanup #66

### Fixed
- Correctly close and join mp pool #60
- Fix switched Rayleigh and Brillouin regions in test #62

## 0.0.11 - 2022-02-01

### Added
- Implement peak finding for calibration spectra #56
- Allow to add regions by frequency #59

### Changed
- Don't show runtime warning for fitting #54
- Calculate derived values during evaluation #55
- Bundle auto evaluation in a general controller #58
- Code cleanup #52 #57

### Fixed
- Correct bmlab citation hint #51
- Don't fail when not enough peaks for frequency axis #53

## 0.0.4

- setup: use "pytest" command instead of deprecated "setup.py test"
- get metadata from HDF file
- set image orientation

## 0.0.3

- testing connection with BMicro

## 0.0.2

- CI test release

## 0.0.1

- dummy release