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Problems with single-end sequencing downloads #16

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Dx-wmc opened this issue Nov 29, 2024 · 3 comments
Closed

Problems with single-end sequencing downloads #16

Dx-wmc opened this issue Nov 29, 2024 · 3 comments

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@Dx-wmc
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Dx-wmc commented Nov 29, 2024

Hi, I've noticed that iseq has no problem downloading double-ended sequencing from ena, but none of the gz files downloaded from single-ended sequencing can be unzipped. The gz files I get using the ftp download address prompted in iseq unzip just fine, is something wrong?

@BioOmics
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BioOmics commented Dec 5, 2024

Can you give me the code you used?

@Dx-wmc
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Dx-wmc commented Dec 6, 2024

The command I used is "iseq -i SRR18030918 -g -t 20 -p 1 -o ."

@BioOmics
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Now, you can try the latest version, iSeq v1.4.0 (Also can be installed by Bioconda later). Thank you again for pointing out the issues.

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