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Provisional_Cell_Ontology.ttl
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@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix : <http://www.jcvi.org/framework/nsf2_full_mtg#> .
@prefix mtg_sc: <http://www.jcvi.org/framework/mtg_schema#> .
@prefix obo_sc: <http://www.jcvi.org/framework/obo_schema#> .
@prefix go_sc: <http://www.jcvi.org/framework/go_schema#> .
@prefix cl: <http://purl.obolibrary.org/obo/cl#> .
@prefix hugo: <http://ncicb.nci.nih.gov/xml/owl/evs/hugo#> .
@prefix uberon: <http://purl.obolibrary.org/obo/uberon#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
<http://www.jcvi.org/framework/nsf2_full_mtg>
rdf:type owl:Ontology ;
owl:versionInfo "$Id: Provisional_Cell_Ontology.ttl, Ver 1.0, Nov 8, 2018, Mohamed Keshk. $" .
# ******************* MTG_Cluster_Annotation Concepts *******************
:pCL1
a skos:Concept ;
obo_sc:id "pCL1" ;
skos:broader :pCL78 ;
rdfs:label "TGFBR2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 PAX6 CDH12" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "90"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.80"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11773 ;
obo_sc:expresses "LOC101927870" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL2
a skos:Concept ;
obo_sc:id "pCL2" ;
skos:broader :pCL78 ;
rdfs:label "SP8-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 PAX6 TNFAIP8L3" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "16"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.83"^^xsd:double ;
obo_sc:expresses hugo:HGNC_19196 ;
obo_sc:expresses "LINC01497" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL3
a skos:Concept ;
obo_sc:id "pCL3" ;
skos:broader :pCL78 ;
rdfs:label "NDNF-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1 SST NMBR" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:cluster_size "283"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.90"^^xsd:double ;
obo_sc:expresses hugo:HGNC_26256 ;
obo_sc:expresses hugo:HGNC_30670 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL4
a skos:Concept ;
obo_sc:id "pCL4" ;
skos:broader :pCL78 ;
rdfs:label "KIT-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-4 LAMP5 LCP2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "356"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.82"^^xsd:double ;
obo_sc:expresses hugo:HGNC_6342 ;
obo_sc:expresses hugo:HGNC_27652 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL5
a skos:Concept ;
obo_sc:id "pCL5" ;
skos:broader :pCL78 ;
rdfs:label "CPLX3-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 LAMP5 DBP" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "21"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.34"^^xsd:double ;
obo_sc:expresses hugo:HGNC_27652 ;
obo_sc:expresses hugo:HGNC_16231 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL6
a skos:Concept ;
obo_sc:id "pCL6" ;
skos:broader :pCL78 ;
rdfs:label "EYA4-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-6 LAMP5 CA1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "256"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.84"^^xsd:double ;
obo_sc:expresses hugo:HGNC_3522 ;
obo_sc:expresses hugo:HGNC_26086 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL7
a skos:Concept ;
obo_sc:id "pCL7" ;
skos:broader :pCL78 ;
rdfs:label "ANKFN1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1 SST CHRNA4" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:cluster_size "52"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.67"^^xsd:double ;
obo_sc:expresses hugo:HGNC_26766 ;
obo_sc:expresses hugo:HGNC_10725 ;
obo_sc:expresses hugo:HGNC_10640 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL8
a skos:Concept ;
obo_sc:id "pCL8" ;
skos:broader :pCL78 ;
rdfs:label "ARHGAP36-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 GAD1 MC4R" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "107"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.62"^^xsd:double ;
obo_sc:expresses hugo:HGNC_26388 ;
obo_sc:expresses hugo:HGNC_15478 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL9
a skos:Concept ;
obo_sc:id "pCL9" ;
skos:broader :pCL78 ;
rdfs:label "BAGE2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 SST BAGE2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "108"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.53"^^xsd:double ;
obo_sc:expresses hugo:HGNC_15723 ;
obo_sc:expresses "LOC105377436" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL10
a skos:Concept ;
obo_sc:id "pCL10" ;
skos:broader :pCL80 ;
rdfs:label "CNR1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 PAX6 SYT6" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "29"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.82"^^xsd:double ;
obo_sc:expresses hugo:HGNC_2159 ;
obo_sc:expresses hugo:HGNC_31822 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL11
a skos:Concept ;
obo_sc:id "pCL11" ;
skos:broader :pCL80 ;
rdfs:label "DCN-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 VIP TSPAN12" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "42"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.55"^^xsd:double ;
obo_sc:expresses hugo:HGNC_2705 ;
obo_sc:expresses "LINC01539" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL12
a skos:Concept ;
obo_sc:id "pCL12" ;
skos:broader :pCL80 ;
rdfs:label "CCDC141-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-4 VIP CHRNA6" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "25"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.56"^^xsd:double ;
obo_sc:expresses "LOC101928923" ;
obo_sc:expresses hugo:HGNC_26821 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL13
a skos:Concept ;
obo_sc:id "pCL13" ;
skos:broader :pCL80 ;
rdfs:label "DACH2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 VIP ADAMTSL1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "72"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.73"^^xsd:double ;
obo_sc:expresses hugo:HGNC_16814 ;
obo_sc:expresses hugo:HGNC_14268 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL14
a skos:Concept ;
obo_sc:id "pCL14" ;
skos:broader :pCL80 ;
rdfs:label "EGFEM1P-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-4 VIP PENK" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "17"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.61"^^xsd:double ;
obo_sc:expresses hugo:HGNC_25149 ;
obo_sc:expresses "LOC105371331" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL15
a skos:Concept ;
obo_sc:id "pCL15" ;
skos:broader :pCL80 ;
rdfs:label "PCP4|IGFBP7-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-6 VIP QPCT" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "37"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.75"^^xsd:double ;
obo_sc:expresses hugo:HGNC_8742 ;
obo_sc:expresses hugo:HGNC_5476 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL16
a skos:Concept ;
obo_sc:id "pCL16" ;
skos:broader :pCL80 ;
rdfs:label "IQGAP2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L3-6 VIP HS3ST3A1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "80"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.57"^^xsd:double ;
obo_sc:expresses hugo:HGNC_6111 ;
obo_sc:expresses hugo:HGNC_17265 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL17
a skos:Concept ;
obo_sc:id "pCL17" ;
skos:broader :pCL80 ;
rdfs:label "ANGPT1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 VIP PCDH20" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "61"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.62"^^xsd:double ;
obo_sc:expresses hugo:HGNC_484 ;
obo_sc:expresses hugo:HGNC_12693 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL18
a skos:Concept ;
obo_sc:id "pCL18" ;
skos:broader :pCL80 ;
rdfs:label "TAC3|TSHZ2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-5 VIP SERPINF1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "55"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.62"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11521 ;
obo_sc:expresses hugo:HGNC_13010 ;
obo_sc:expresses "LINC01583" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL19
a skos:Concept ;
obo_sc:id "pCL19" ;
skos:broader :pCL80 ;
rdfs:label "TAC3|COL15A1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-5 VIP TYR" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "62"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.57"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11521 ;
obo_sc:expresses hugo:HGNC_2192 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL20
a skos:Concept ;
obo_sc:id "pCL20" ;
skos:broader :pCL80 ;
rdfs:label "LOC100421401-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 VIP CHRM2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "175"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.56"^^xsd:double ;
obo_sc:expresses "LOC100421401" ;
obo_sc:expresses "LOC101060145" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL21
a skos:Concept ;
obo_sc:id "pCL21" ;
skos:broader :pCL80 ;
rdfs:label "HTR2C-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-4 VIP CBLN1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "67"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.68"^^xsd:double ;
obo_sc:expresses hugo:HGNC_5295 ;
obo_sc:expresses hugo:HGNC_7154 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL22
a skos:Concept ;
obo_sc:id "pCL22" ;
skos:broader :pCL80 ;
rdfs:label "KCNH8-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 VIP CCDC184" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "64"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.48"^^xsd:double ;
obo_sc:expresses hugo:HGNC_18864 ;
obo_sc:expresses hugo:HGNC_21397 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL23
a skos:Concept ;
obo_sc:id "pCL23" ;
skos:broader :pCL80 ;
rdfs:label "GGH-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 VIP GGH" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "68"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.53"^^xsd:double ;
obo_sc:expresses hugo:HGNC_4248 ;
obo_sc:expresses "LOC105375473" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL24
a skos:Concept ;
obo_sc:id "pCL24" ;
skos:broader :pCL80 ;
rdfs:label "C18orf42-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-2 VIP LBH" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "47"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.49"^^xsd:double ;
obo_sc:expresses hugo:HGNC_28285 ;
obo_sc:expresses "LOC105379146" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL25
a skos:Concept ;
obo_sc:id "pCL25" ;
skos:broader :pCL80 ;
rdfs:label "LRRC63-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-3 VIP CASC6" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "45"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.56"^^xsd:double ;
obo_sc:expresses hugo:HGNC_34296 ;
obo_sc:expresses hugo:HGNC_49076 ;
obo_sc:expresses "LOC105370456" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL26
a skos:Concept ;
obo_sc:id "pCL26" ;
skos:broader :pCL80 ;
rdfs:label "SLC7A11-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-4 VIP SPAG17" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "33"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.53"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11059 ;
obo_sc:expresses "LINC00836" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL27
a skos:Concept ;
obo_sc:id "pCL27" ;
skos:broader :pCL80 ;
rdfs:label "PCP4|LINC01583-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-4 VIP OPRM1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "52"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.58"^^xsd:double ;
obo_sc:expresses hugo:HGNC_8742 ;
obo_sc:expresses "LINC01583" ;
obo_sc:expresses hugo:HGNC_10967 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL28
a skos:Concept ;
obo_sc:id "pCL28" ;
skos:broader :pCL81 ;
rdfs:label "NPY-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L3-6 SST NPY" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "15"^^xsd:int ;
mtg_sc:marker_gene_evidence "1"^^xsd:int ;
mtg_sc:f_measure_evidence "0.99"^^xsd:double ;
obo_sc:expresses hugo:HGNC_7955 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL29
a skos:Concept ;
obo_sc:id "pCL29" ;
skos:broader :pCL81 ;
rdfs:label "HPGD-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L3-6 SST HPGD" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "60"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.66"^^xsd:double ;
obo_sc:expresses hugo:HGNC_5154 ;
obo_sc:expresses hugo:HGNC_25057 ;
obo_sc:expresses hugo:HGNC_21063 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL30
a skos:Concept ;
obo_sc:id "pCL30" ;
skos:broader :pCL81 ;
rdfs:label "NMU-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L4-6 SST B3GAT2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "182"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.61"^^xsd:double ;
obo_sc:expresses hugo:HGNC_7859 ;
obo_sc:expresses hugo:HGNC_23399 ;
obo_sc:expresses hugo:HGNC_11521 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL31
a skos:Concept ;
obo_sc:id "pCL31" ;
skos:broader :pCL81 ;
rdfs:label "LOC100996671-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 SST KLHDC8A" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "63"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.61"^^xsd:double ;
obo_sc:expresses "LOC100996671" ;
obo_sc:expresses "LOC105377701" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL32
a skos:Concept ;
obo_sc:id "pCL32" ;
skos:broader :pCL81 ;
rdfs:label "SPON1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 SST NPM1P10" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "79"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.78"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11252 ;
obo_sc:expresses hugo:HGNC_3604 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL33
a skos:Concept ;
obo_sc:id "pCL33" ;
skos:broader :pCL81 ;
rdfs:label "QRFPR-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L4-6 SST GXYLT2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "41"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.62"^^xsd:double ;
obo_sc:expresses hugo:HGNC_15565 ;
obo_sc:expresses hugo:HGNC_20151 ;
obo_sc:expresses "LOC101929667" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL34
a skos:Concept ;
obo_sc:id "pCL34" ;
skos:broader :pCL81 ;
rdfs:label "SLC9A2-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L4-5 SST STK32A" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "93"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.55"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11072 ;
obo_sc:expresses hugo:HGNC_28317 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL35
a skos:Concept ;
obo_sc:id "pCL35" ;
skos:broader :pCL81 ;
rdfs:label "LOC101929028-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L1-3 SST CALB1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "279"^^xsd:int ;
mtg_sc:marker_gene_evidence "1"^^xsd:int ;
mtg_sc:f_measure_evidence "0.64"^^xsd:double ;
obo_sc:expresses "LOC101929028" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL36
a skos:Concept ;
obo_sc:id "pCL36" ;
skos:broader :pCL81 ;
rdfs:label "ADGRG6-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L3-5 SST ADGRG6" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "132"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.66"^^xsd:double ;
obo_sc:expresses hugo:HGNC_13841 ;
obo_sc:expresses hugo:HGNC_9454 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL37
a skos:Concept ;
obo_sc:id "pCL37" ;
skos:broader :pCL81 ;
rdfs:label "EYS-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-4 SST FRZB" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "64"^^xsd:int ;
mtg_sc:marker_gene_evidence "4"^^xsd:int ;
mtg_sc:f_measure_evidence "0.52"^^xsd:double ;
obo_sc:expresses hugo:HGNC_21555 ;
obo_sc:expresses hugo:HGNC_18374 ;
obo_sc:expresses hugo:HGNC_7872 ;
obo_sc:expresses hugo:HGNC_7603 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL38
a skos:Concept ;
obo_sc:id "pCL38" ;
skos:broader :pCL81 ;
rdfs:label "TH-expressing-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 SST TH" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "27"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.71"^^xsd:double ;
obo_sc:expresses "LOC102724957" ;
obo_sc:expresses hugo:HGNC_11782 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL39
a skos:Concept ;
obo_sc:id "pCL39" ;
skos:broader :pCL82 ;
rdfs:label "CPED1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 GAD1 GLP1R" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer6" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "27"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.75"^^xsd:double ;
obo_sc:expresses hugo:HGNC_26159 ;
obo_sc:expresses hugo:HGNC_10725 ;
obo_sc:expresses hugo:HGNC_983 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL40
a skos:Concept ;
obo_sc:id "pCL40" ;
skos:broader :pCL82 ;
rdfs:label "ANKRD34B-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 PVALB LGR5" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "52"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.56"^^xsd:double ;
obo_sc:expresses hugo:HGNC_33736 ;
obo_sc:expresses "LOC401478" ;
obo_sc:expresses hugo:HGNC_26159 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL41
a skos:Concept ;
obo_sc:id "pCL41" ;
skos:broader :pCL82 ;
rdfs:label "SPP1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L4-5 PVALB MEPE" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "64"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.67"^^xsd:double ;
obo_sc:expresses hugo:HGNC_11255 ;
obo_sc:expresses hugo:HGNC_4893 ;
obo_sc:expresses hugo:HGNC_13361 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL42
a skos:Concept ;
obo_sc:id "pCL42" ;
skos:broader :pCL82 ;
rdfs:label "SLC9A9-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-4 PVALB WFDC2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "387"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.79"^^xsd:double ;
obo_sc:expresses hugo:HGNC_20653 ;
obo_sc:expresses hugo:HGNC_11517 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL43
a skos:Concept ;
obo_sc:id "pCL43" ;
skos:broader :pCL82 ;
rdfs:label "SULF1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L4-6 PVALB SULF1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "167"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.55"^^xsd:double ;
obo_sc:expresses hugo:HGNC_20391 ;
obo_sc:expresses hugo:HGNC_26159 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL44
a skos:Concept ;
obo_sc:id "pCL44" ;
skos:broader :pCL82 ;
rdfs:label "LYPD6-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L5-6 SST MIR548F2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "80"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.63"^^xsd:double ;
obo_sc:expresses hugo:HGNC_28751 ;
obo_sc:expresses hugo:HGNC_8614 ;
obo_sc:expresses hugo:HGNC_4453 ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL45
a skos:Concept ;
obo_sc:id "pCL45" ;
skos:broader :pCL82 ;
rdfs:label "COL15A1-expressing cerebral cortex MTG GABAergic interneuron" ;
mtg_sc:evidence "Inh L2-5 PVALB SCUBE3" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "32"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.82"^^xsd:double ;
obo_sc:expresses hugo:HGNC_2192 ;
obo_sc:expresses "LOC401478" ;
mtg_sc:neuron_type "GABAergic" ;
.
:pCL46
a skos:Concept ;
obo_sc:id "pCL46" ;
skos:broader :pCL77 ;
rdfs:label "CBLN2-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L2 LAMP5 LTK" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer1" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:cluster_size "812"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.67"^^xsd:double ;
obo_sc:expresses "LINC01500" ;
obo_sc:expresses hugo:HGNC_1544 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL47
a skos:Concept ;
obo_sc:id "pCL47" ;
skos:broader :pCL77 ;
rdfs:label "PENK-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L2-4 LINC00507 GLP2R" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "170"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.66"^^xsd:double ;
obo_sc:expresses hugo:HGNC_8831 ;
obo_sc:expresses hugo:HGNC_16709 ;
obo_sc:expresses hugo:HGNC_21063 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL48
a skos:Concept ;
obo_sc:id "pCL48" ;
skos:broader :pCL77 ;
rdfs:label "PALMD-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L2-3 LINC00507 FREM3" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer2" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:cluster_size "2284"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.77"^^xsd:double ;
obo_sc:expresses hugo:HGNC_15846 ;
obo_sc:expresses hugo:HGNC_19347 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL49
a skos:Concept ;
obo_sc:id "pCL49" ;
skos:broader :pCL77 ;
rdfs:label "PXDN-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L5-6 THEMIS C1QL3" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer6" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:has_soma_location_in "cortical_layer6" ;
mtg_sc:cluster_size "1537"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.79"^^xsd:double ;
obo_sc:expresses "LINC00343" ;
obo_sc:expresses hugo:HGNC_14966 ;
obo_sc:expresses hugo:HGNC_21569 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL50
a skos:Concept ;
obo_sc:id "pCL50" ;
skos:broader :pCL77 ;
rdfs:label "CCDC68-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L3-4 RORB CARM1P1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:cluster_size "280"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.68"^^xsd:double ;
obo_sc:expresses hugo:HGNC_24350 ;
obo_sc:expresses hugo:HGNC_23392 ;
obo_sc:expresses hugo:HGNC_9477 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL51
a skos:Concept ;
obo_sc:id "pCL51" ;
skos:broader :pCL77 ;
rdfs:label "ANXA1-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L3-5 RORB ESR1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "1428"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.88"^^xsd:double ;
obo_sc:expresses hugo:HGNC_533 ;
obo_sc:expresses "LOC105371677" ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL52
a skos:Concept ;
obo_sc:id "pCL52" ;
skos:broader :pCL77 ;
rdfs:label "RMST-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L3-5 RORB COL22A1" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "160"^^xsd:int ;
mtg_sc:marker_gene_evidence "2"^^xsd:int ;
mtg_sc:f_measure_evidence "0.78"^^xsd:double ;
obo_sc:expresses hugo:HGNC_29893 ;
obo_sc:expresses hugo:HGNC_7154 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL53
a skos:Concept ;
obo_sc:id "pCL53" ;
skos:broader :pCL77 ;
rdfs:label "CUX2-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L3-5 RORB FILIP1L" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "153"^^xsd:int ;
mtg_sc:marker_gene_evidence "4"^^xsd:int ;
mtg_sc:f_measure_evidence "0.65"^^xsd:double ;
obo_sc:expresses hugo:HGNC_19347 ;
obo_sc:expresses hugo:HGNC_23319 ;
obo_sc:expresses hugo:HGNC_2210 ;
obo_sc:expresses "LOC101928196" ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL54
a skos:Concept ;
obo_sc:id "pCL54" ;
skos:broader :pCL77 ;
rdfs:label "TWIST2-expressing cerebral cortex MTG Glutamatergic neuron" ;
mtg_sc:evidence "Exc L3-5 RORB TWIST2" ;
go_sc:part_of uberon:UBERON_0002771 ;
mtg_sc:enriched_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer3" ;
mtg_sc:has_soma_location_in "cortical_layer4" ;
mtg_sc:has_soma_location_in "cortical_layer5" ;
mtg_sc:cluster_size "93"^^xsd:int ;
mtg_sc:marker_gene_evidence "3"^^xsd:int ;
mtg_sc:f_measure_evidence "0.27"^^xsd:double ;
obo_sc:expresses hugo:HGNC_20670 ;
obo_sc:expresses "LOC101927281" ;
obo_sc:expresses hugo:HGNC_26851 ;
mtg_sc:neuron_type "Glutamatergic" ;
.
:pCL55