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Gold standard AUC/ROC hit comparison across pipelines #4

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abearab opened this issue Dec 8, 2023 · 3 comments
Closed
Tracked by #12

Gold standard AUC/ROC hit comparison across pipelines #4

abearab opened this issue Dec 8, 2023 · 3 comments
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analysis A data analysis step or task help wanted Extra attention is needed
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Benchmark ScreenP...

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abearab commented Dec 8, 2023

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abearab commented Dec 8, 2023 •
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Figure 3D – https://elifesciences.org/articles/19760

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Figure S1D – https://elifesciences.org/articles/81856#fig1s1
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@abearab abearab added the analysis A data analysis step or task label Dec 12, 2023
@abearab abearab added the help wanted Extra attention is needed label Mar 12, 2024
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abearab commented Mar 12, 2024

@tdfair

@abearab abearab mentioned this issue Jul 4, 2024
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@abearab abearab self-assigned this Aug 2, 2024
@abearab abearab mentioned this issue Aug 6, 2024
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abearab commented Aug 12, 2024

I performed the analysis for a V2 screen dataset here DAC-AML-CRISPR-screens.ipynb

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A similar analysis performed for an unpublished V3 dataset and here is the result:

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@abearab abearab closed this as completed Aug 12, 2024
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