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*.asv
test_data/1 MAP input/72824906.tif
test_data/1 MAP input/72824906_coords.csv
test_data/1 MAP input/74787803.tif
test_data/1 MAP input/74787803_coords.csv
test_data/1 MAP input/7657484.tif
test_data/1 MAP input/7657484_coords.csv
test_data/1 MAP input/LUT (1) for PCD TIFs.csv
test_data/1 MAP output/72824906_bounddensity_matrix_13-Nov-2023.csv
test_data/1 MAP output/72824906_coords_bound_map_13-Nov-2023_Bound_Density_fig.png
test_data/1 MAP output/72824906_coords_bound_map_13-Nov-2023_Bound_Density_marked.tif
test_data/1 MAP output/72824906_coords_bound_map_13-Nov-2023_Bound_Density_raw5.tif
test_data/1 MAP output/74787803_bounddensity_matrix_13-Nov-2023.csv
test_data/1 MAP output/74787803_coords_bound_map_13-Nov-2023_Bound_Density_fig.png
test_data/1 MAP output/74787803_coords_bound_map_13-Nov-2023_Bound_Density_marked.tif
test_data/1 MAP output/74787803_coords_bound_map_13-Nov-2023_Bound_Density_raw5.tif
test_data/1 MAP output/7657484_bounddensity_matrix_13-Nov-2023.csv
test_data/1 MAP output/7657484_coords_bound_map_13-Nov-2023_Bound_Density_fig.png
test_data/1 MAP output/7657484_coords_bound_map_13-Nov-2023_Bound_Density_marked.tif
test_data/1 MAP output/7657484_coords_bound_map_13-Nov-2023_Bound_Density_raw5.tif
test_data/2 PCD_CDC input/72824906_bounddensity_matrix_13-Nov-2023.csv
test_data/2 PCD_CDC input/74787803_bounddensity_matrix_13-Nov-2023.csv
test_data/2 PCD_CDC input/7657484_bounddensity_matrix_13-Nov-2023.csv
test_data/2 PCD_CDC input/LUT (1) for PCD TIFs.csv
test_data/2 PCD_CDC output/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/Analysis Summary/All_max_coords_80_percentile_13-Nov-2023.csv
test_data/2 PCD_CDC output/Analysis Summary/PCD_CDC_Analysis_Summary_13-Nov-2023.csv
test_data/3 Ellipse_contour input/325042804_bounddensity_matrix_13-Nov-2023.csv
test_data/3 Ellipse_contour input/712805202_bounddensity_matrix_13-Nov-2023.csv
test_data/3 Ellipse_contour input/LUT (1) for PCD TIFs.csv
test_data/3 Ellipse_contour output/325042804_bounddensity_matrix_13-Nov-2023.csv
test_data/3 Ellipse_contour output/325042804_combined_contours.csv
test_data/3 Ellipse_contour output/325042804_combined_contours.tif
test_data/3 Ellipse_contour output/712805202_combined_contours.csv
test_data/3 Ellipse_contour output/712805202_combined_contours.tif
test_data/3 Ellipse_contour output/EllipseCenterCoords_13-Nov-2023.csv
test_data/3 Ellipse_contour output/EllipseCenterCoords_28-Nov-2023.csv
test_data/4 Compare_windows input/CDC_Table.csv
test_data/4 Compare_windows input/CDC_Table.xlsx
test_data/4 Compare_windows input/Compare_Observers_Ellipse_Input_Instructions.docx
test_data/4 Compare_windows input/Compare_Script_Instructions.docx
test_data/4 Compare_windows input/PCD_Table.csv
test_data/4 Compare_windows input/PCD_Table.xlsx
test_data/4 Compare_windows output/72824906.fig
test_data/4 Compare_windows output/72824906.tif
test_data/4 Compare_windows output/72824906_95CI_CDC.fig
test_data/4 Compare_windows output/72824906_95CI_CDC.tif
test_data/4 Compare_windows output/72824906_95CI_PCD.fig
test_data/4 Compare_windows output/72824906_95CI_PCD.tif
test_data/4 Compare_windows output/74787803.fig
test_data/4 Compare_windows output/74787803.tif
test_data/4 Compare_windows output/74787803_95CI_CDC.fig
test_data/4 Compare_windows output/74787803_95CI_CDC.tif
test_data/4 Compare_windows output/74787803_95CI_PCD.fig
test_data/4 Compare_windows output/74787803_95CI_PCD.tif
test_data/4 Compare_windows output/7657484.fig
test_data/4 Compare_windows output/7657484.tif
test_data/4 Compare_windows output/7657484_95CI_CDC.fig
test_data/4 Compare_windows output/7657484_95CI_CDC.tif
test_data/4 Compare_windows output/7657484_95CI_PCD.fig
test_data/4 Compare_windows output/7657484_95CI_PCD.tif
test_data/7 new maps_standalone maps input/72824906.tif
test_data/7 new maps_standalone maps input/72824906_coords.csv
test_data/7 new maps_standalone maps input/72824906_window_results_08-Feb-2024.mat
test_data/7 new maps_standalone maps input/74787803.tif
test_data/7 new maps_standalone maps input/74787803_coords.csv
test_data/7 new maps_standalone maps input/74787803_window_results_08-Feb-2024.mat
test_data/7 new maps_standalone maps input/7657484.tif
test_data/7 new maps_standalone maps input/7657484_coords.csv
test_data/7 new maps_standalone maps input/7657484_window_results_08-Feb-2024.mat
test_data/7 new maps_standalone maps output/72824906_bound_area_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/72824906_bound_density_deg_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/72824906_bounddensity_matrix_DEG_10_Apr_2024.csv
test_data/7 new maps_standalone maps output/72824906_bounddensity_matrix_DEG_MATFILE_10_Apr_2024.mat
test_data/7 new maps_standalone maps output/74787803_bound_area_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/74787803_bound_density_deg_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/74787803_bounddensity_matrix_DEG_10_Apr_2024.csv
test_data/7 new maps_standalone maps output/74787803_bounddensity_matrix_DEG_MATFILE_10_Apr_2024.mat
test_data/7 new maps_standalone maps output/7657484__bound_area_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/7657484__bound_density_deg_map_10_Apr_2024_raw.tif
test_data/7 new maps_standalone maps output/7657484__bounddensity_matrix_DEG_10_Apr_2024.csv
test_data/7 new maps_standalone maps output/7657484__bounddensity_matrix_DEG_MATFILE_10_Apr_2024.mat
test_data/2 PCD_CDC output/New folder/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/New folder/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/New folder/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/New folder/72824906_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/New folder/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/New folder/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/New folder/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/New folder/74787803_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/New folder/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80.tif
test_data/2 PCD_CDC output/New folder/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_80_only.tif
test_data/2 PCD_CDC output/New folder/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_contour_80.csv
test_data/2 PCD_CDC output/New folder/7657484_bounddensity_matrix_13-Nov-2023.csv_bestFitEllipse_marked.tif
test_data/2 PCD_CDC output/New folder/All_max_coords_80_percentile_10_Apr_2024.csv
test_data/2 PCD_CDC output/New folder/PCD_CDC_Analysis_Summary_10_Apr_2024.csv
test_data/2 PCD_CDC output/All_max_coords_80_percentile_10_Apr_2024.csv
test_data/2 PCD_CDC output/PCD_CDC_Analysis_Summary_10_Apr_2024.csv